Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1344 ATGACCGATTCCGAAGAAGAAAATCCCGACCTTCCTCCCAAGTCAGCGCCCAAGGCGGAGGAACCTGGGTCCGTCATGGATTTCGATCTGGACCTGGAGACTTCTTGGCCGTTGGATCAGATATCTTTTGGCTCTAACCCTATGTCTCCTTTTCTTATCCCTGCCACCTCGGAGCAACCTTTTTCTCCTCTCTGGGTTTTCTCAGACCTAGACGATGATAAGCAAGCTAGACTTGCCGCTTCCGCTTTCTCCGACGGCCATCGATTGTTCTCCTGCAATTCATATTCAGCAGGTGAAAAACCAGTGGAAAATGAGGAGAACCAGAAACTTCATTCGCCCTTTGTGGCTCTGCCACCATTAGAAAATCTTGATGGTTATTGTCTAATCAAAGAAAGGATGACACAAGCACTAAGGTACTTCAAAGAGTTGGCTGAACATAATGTTCTGGCTCAGTTTTGGGCACCTGTGAGGATTGGGAACCAGTATTTGCTTACAACTTCAGGGCAACCCTTTGTTCTTGATCCACATAGTAATGGACTATATCAGTATAGAACAGTCTCTCTGACGTACATGTTTCCTGTGGATGGGGAGAATGATGTAATCCTGGGACTTCCTGGTCGTGTTTTTCAGCAGAAGTTGCCTGAATGGTCTCCCAATGTTCAATACTATTCTAATAGAGAGTATCCACGTCGAAATCATGCTCAAAATTACAATGTTCGTGGAACCTTGGCTTTGCCTGTGTTTGAATCTTCAGGGCAGTCATGTGTTGGTGTACTGGAATTGATAATGACTTCTCAGAAGATTAACTATGCTCCTGAGGTTGATAAAGTCTGCAAAGCACTTGAGGCAGTAAATTTGAAGAGTTCAGAAATTTTGGCACATCCATACACTCAGATTTGTAGTGAAAGCCGCCAGAATGCATTAGCAGAGATTTTGGAGATATTGACAGTGGTGTGTGAAACTTATAAATTACCTCTGGCCCAAACATGGGTTCCCTGTAGGCATCGGAGTGTTCTAGCCCACGGTGGTGGCCTGAAGAAGAGCTGCTCAAGCTTTGATGGTAGTTGCATGGGGAAAGTTTGCATATCTACTACTGATGTAGCATTCTATGTCGTAGATGCTCATATATGGGGTTTCCGTGAAGCCTGCGGTGAGCATCACTTACAACAGGGTCAAGGGGTTGCTGGGAAGGCATTTTTGTCTGGCAATATGTGCTTCTGTGGAAACATTACCAAGTTCTGCAAAACTGAGTACCCCTTGGTACATTACGCTCTCATGTTTGGCTTAACCAGCTGTTTTGCAATCTGTCTACAAAGCTCTCATACTGGAAATGATGATTATATATTAGAGTTTTTTCTGCCTCCTGAGATCACTGACTTCAATGAACAAAAGACTGTGTTGGGATCTATATTGGTAACAATGAAACAGCATTTCCAGAGTCTTAAGATAGCTGCTGGTGGTGAACTCGAGGAGGAAGGTTCAATCGAAATCATTGAAGTAACAAATGAAAGAGGTTACTCAAGGCTTTAG 1530 0.4392 MTDSEEENPDLPPKSAPKAEEPGSVMDFDLDLETSWPLDQISFGSNPMSPFLIPATSEQPFSPLWVFSDLDDDKQARLAASAFSDGHRLFSCNSYSAGEKPVENEENQKLHSPFVALPPLENLDGYCLIKERMTQALRYFKELAEHNVLAQFWAPVRIGNQYLLTTSGQPFVLDPHSNGLYQYRTVSLTYMFPVDGENDVILGLPGRVFQQKLPEWSPNVQYYSNREYPRRNHAQNYNVRGTLALPVFESSGQSCVGVLELIMTSQKINYAPEVDKVCKALEAVNLKSSEILAHPYTQICSESRQNALAEILEILTVVCETYKLPLAQTWVPCRHRSVLAHGGGLKKSCSSFDGSCMGKVCISTTDVAFYVVDAHIWGFREACGEHHLQQGQGVAGKAFLSGNMCFCGNITKFCKTEYPLVHYALMFGLTSCFAICLQSSHTGNDDYILEFFLPPEITDFNEQKTVLGSILVTMKQHFQSLKIAAGGELEEEGSIEIIEVTNERGYSRL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1344 509 PANTHER PROTEIN NLP8 57 501 IPR045012 GO:0003700
Dere06g1344 509 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1344 Dere-ChrDere06 25814528 25817085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1344 180 509 NLP Transcription Factor Family AT1G64530 72.590 1.89e-179 518