Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1338 ATGGATTCGAATCATCTGAAGCAATTGGATCGCGCCAAGGTCAACAGCGCTGGACCGAACAGAAAGGTTCGGGTAGTGGCCAAGGTCAGGGGCTTTACGAGTCCGAATGCGGAGGCTCAGAATGGGGATTCGAGATCGGTGGACTGGATTTTGGTGAACAAGCCTCACGGAGAGAGTTCAGAGGGAGTCGCAATCTCCTTCAGGGAACAATCTTCCAGTCGTAAAGAGCCTTACCGGGTGGACTATTGCTATGGGGAATATGAAGAAAATGAAGTGATCTATTCAAGAGACGTGAGATCTCTTATATCCACAGTTTTTGAAGGCCATAACAGCACAATTATTGCATGTGGAGCAAGAGGCAGTGGAAAGACTCGTGTTATTCAGGGTTCTGTTGAGGCTCCTGGTTTGTCAGTGCTTACTATCACTGAGTTTCTTTCAATGGCTGAGCAAAATGGGAAATCTATTGCTGTATCATTCTATGAAGTTGATCATCAGGAGCATGCTGTTGATTTATTGAATCCAGAACAACCAGCCATTTTAGTTTTTGAAGACAGAGGCCGAATTCAGTTTAAAGGGCTTTCTCAGGTACCTGTGAAATCCATAGCAGAGTTTCAGAAATTATACTTCACTGCTTGTGCTTCTCAAAAGGCAGCCGTGAAAAAGGGCAGTGACCGTGCTCGTAGAAGCCATGTGGGATTAATGGTACATGTCCTTTCCGATGCTGAAAGCACAGAAACTGGTTATGTAGGCAAAATGAATTTTGTTGAGTTGGCAGGTTATGAAGATGCTAGAAAAAAGAGTAGTGATAGCTCTTGCCTTGGGGAGACAAATAAAATAAACAAGTCCATGTATGCTATATTAAATGTCTGTCACGCTTTAAGCACCAACGAAAGTCGTGTTCCCTATCGTGAAAGCAAACTTACGCGCATATTACAAGATTCTTTGAGAGGGACTAGCAGAATTTTGATGGTTGTCTGCATGAACCCATCTTTTTGCCAAGACACAATCTACATGTTAAGCTTAGTATCACGGTCATGTCAAGGGATTCATCAGGCAACCTCAGATTCCGCAAAGAAAATTGGAAGTTGTTCAGCAAGACAGATGACGGTTACATCTTGTAAGAGTCAGGCGCTCAAGAGTGTTTCTTCTACAGCAAAAAAATTAATTGGCTCCAGATCACATATACATGAAAAGAAAGCTGCTGTTGTTATAAAATCTGATACAAAAGGAAGGAAATTATTTGATGATGCAAGTCATTCTGCTAAAGCTGAGAAGGCAAGGATGTCAGATACCAGTTCTACCTGTGAAACTTCAGTGCAGGAAGAGGTACAGGAAAACTCCATTGCACATGTTTCCAAAGCATCAGTTCTATCATCAGTGGATGACTCGGTTTCAGATGGTAGGTATCAAGCAGAACTCGTGGTGGAAAAGGTAACAGAACTAATGATTGTCCCTGAGAAAACTGAGGATCATCAACAGGAACATACTCCTAATTCTAGCAAATACTCGAGAGCATTGTTGACAGACTCTATAGATCAGAAAGGTCATAATATGGACAAGGAAAACAAAAGTTTCATTGCTAATAAAAATGCATCACCGCCCATCAGTGCTCAACTGCGTGAAGTGTCAAACAATTTGAAGCGTCTCTTGTCATCAACTCCATTATGCGTGAGGATACCAGAACAGGAGTGCATGAGATCGTTTGACAATCAGGTGTCTTCAACTGATATTGCAGAACCAAGAACACCTGTCACTGAACAAATTGTGAGAGTTACTGATAGATGGGATGTCATGAATCCCAAAAGTCCCTGGGAAACATACAGCATGCGCAGTTCTGGAATGAAGAACTCTCTTGTTGAAGAATATCTTAGGTTCTTAAACACTGCTGACAAGGACGAATTGAAAAAATTAAAGGGTATTGGAGAGAAGAGAGCAACATACATACTTGAGCGTCGTGAAGAATCTTCTGAACCTTTCAAAAGCCTTGATGATTTACAGGACATTGGACTTTCAGCAAAACAGATCAAGAGGATGATGAAAAAGGAAGTTGGAGAGTTCTTCAATTAG 2067 0.4175 MDSNHLKQLDRAKVNSAGPNRKVRVVAKVRGFTSPNAEAQNGDSRSVDWILVNKPHGESSEGVAISFREQSSSRKEPYRVDYCYGEYEENEVIYSRDVRSLISTVFEGHNSTIIACGARGSGKTRVIQGSVEAPGLSVLTITEFLSMAEQNGKSIAVSFYEVDHQEHAVDLLNPEQPAILVFEDRGRIQFKGLSQVPVKSIAEFQKLYFTACASQKAAVKKGSDRARRSHVGLMVHVLSDAESTETGYVGKMNFVELAGYEDARKKSSDSSCLGETNKINKSMYAILNVCHALSTNESRVPYRESKLTRILQDSLRGTSRILMVVCMNPSFCQDTIYMLSLVSRSCQGIHQATSDSAKKIGSCSARQMTVTSCKSQALKSVSSTAKKLIGSRSHIHEKKAAVVIKSDTKGRKLFDDASHSAKAEKARMSDTSSTCETSVQEEVQENSIAHVSKASVLSSVDDSVSDGRYQAELVVEKVTELMIVPEKTEDHQQEHTPNSSKYSRALLTDSIDQKGHNMDKENKSFIANKNASPPISAQLREVSNNLKRLLSSTPLCVRIPEQECMRSFDNQVSSTDIAEPRTPVTEQIVRVTDRWDVMNPKSPWETYSMRSSGMKNSLVEEYLRFLNTADKDELKKLKGIGEKRATYILERREESSEPFKSLDDLQDIGLSAKQIKRMMKKEVGEFFN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1338 688 Gene3D Kinesin motor domain 3 347 IPR036961 -
Dere06g1338 688 SUPERFAMILY RuvA domain 2-like 619 681 IPR010994 -
Dere06g1338 688 FunFam Kinesin-like protein KIN-10C 612 686 - -
Dere06g1338 688 Gene3D - 614 685 - -
Dere06g1338 688 ProSiteProfiles Kinesin motor domain profile. 22 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere06g1338 688 PRINTS Kinesin heavy chain signature 108 129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere06g1338 688 PRINTS Kinesin heavy chain signature 220 237 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere06g1338 688 PRINTS Kinesin heavy chain signature 300 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere06g1338 688 PRINTS Kinesin heavy chain signature 251 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere06g1338 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 351 IPR027417 -
Dere06g1338 688 FunFam Kinesin-like protein KIN-10C 12 349 - -
Dere06g1338 688 PANTHER KINESIN-RELATED 48 523 IPR027640 GO:0003777|GO:0007018
Dere06g1338 688 SMART kinesin_4 20 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere06g1338 688 Pfam Kinesin motor domain 59 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere06g1338 688 Pfam Helix-hairpin-helix motif 626 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1338 Dere-ChrDere06 25726153 25731511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1338 97 330 Calmodulin-binding Proteins AT5G65930 31.120 4.75e-28 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1338 06 25726153 25731511 Dere06g1338 06 25726153 25731511 ECH