Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1336 ATGCCAGTTGCAAAACACAAGGGTTTTAGTACTCCAGATGTCATGAAAGCAGATGATGGAAATGACTCCTTAGATACCATAATCAGACAGGCAATTGGCAAAGAACCTTTCCTTTCTTTTCCAAGGGCTAGTGATAGTCCTGTTCAGTGGATACAATTACTTAATGCATTAGATCAGCAAGAACTGCCAGGCTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGTTGCAGAAGTGTGAAAAGTGCTCCCGAGAATTCTGCTCTCCAATTAATTATAGAAGGCATATACGCTTTCACCATCGGTTGAAAAAGATTGATAAGGATTCAACAAAAAATAGAGAACTGTTGGGAGCATATTGGGATAAGCTATCTGTAGAAGAGGCGAAGGAAGTTGTATCATTCAAGAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCTATTTTAAAAGAGCTGACAGCTCTTGTTCGAAAACAAGGACTTCCTTCACTTCCGCAGTATTATCTGAAGGCTGGTTCTGCCCTTTTGGATATTGTTCAAGCAAGATCTTCCTTTTTTCCTATATCTTCAAAGGAGTTGTTCAGTATACTTGATAGTGCCAGTGAAAAAACATTTTTATGTGGAACAGCAGTGTCAATGCAAAAATATATTTTTGACGGAGAGCTGGAAAAGATTGGCCTTGAACCCAAAAACTTAGTTGCTTGCACAAGTTTCTTGCTAGAACAGAAATTGGTGAAGGCTTGGCTTGCTGACAAGGAAGCTGAAGCATTGAGGTGCCAGAAGCTACTAGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTAGAGAGGAAACGCCAGAAAAAGCTTAGACAGAAAGAACAGAAGGCAAGGGAGCAAGGACTTGAGGATGAGGCAGAAATTAAAGAGAATGGTAGCAGCATGGTGGCGGATGGTTTACTGGCAGAAGCATCTTTAAATACATGTGCCTTTGAAGTACATAATCTAGATACATTTGCAGACCACGTTCCTACCCCACCTATCCCCTTCCAGTGCGCAGATGCTAATGAAGGTGTAGATGGGGATTCTCAGTCAGCAAATGATTGTGGCACTGATCAGAACATTGAGCAACAGACATCCCAGGGACATATCCGTCAACGCATTGTGGCTGCTCAACCAAAATCACAATGGACTGTAGCTAATGGTTTCCATGCAAGTCAGAACTCTCAAATTTCCAAGCTTGGAGTCATTCAAAAGTATGGAAGCCATCGCGATCAGAGATCGGCTCCTGTACTTAATGGCAACAAAGTATGGAGCCGAAAGCCTAAACAAAAAATTGTTGAAGTAAATTCCAAAGCCAGACTGGAGAAAGAACCAGATCAATGTAAGAATCATGAAGTTTTGATAGGGTCTATATCTGTTACTCTTGGGAATTGTAGCCAATCAGAGGATAGTCTGGTGGCATCACGGGAGGACTTTATACTAGGGAATTTAACCAAACATAGTAGTTCTCAGGAGAAGCAATTGAAGCCTGATTCTGTACAGAATGGTAACAATCGGTCAACAACAAAAGCTCTTAAGTTTTGGAGGCCAGTTAGTCAACATGGAACTAAATATCCTTTACCACTTTTAAGTGGTGGTACAGAAGCTGATACAATAGATGGAAAGAGAGATGATAAAAAATTGTCAGAGCAAAGTTGTTTAAGCTCGTATGACTTAGGTAATAGTGATATTGGTTTTGAGAATAATTCCTCCCATCTGGAGGACCGAGTGGATCCAGGATGCTTACAGTTATCCTCACAGGCTGCTAAAGCCTTTCTCGCAGAAAGATGGAAAGAAGCTATCTCGTCAAACCATGTGAAGTTGGTTATTTCACCTGACTCTGATCCTCCTGGGTGCCAAGAGATACAGGACTGTGAACTAGCAGCATGTCAATCTTCAAATGTTGACAAATGCAGCACTCTTGCAAGTGCAGAGAATCGGCCGTCTGCAACCTCCGCAGCATCTAAATCCAAAATCAGAATGAAGCCCGAAAAGGGTGTCAAGATAAAGTACATTCCCAAACAAAGAACAGTTACTTAA 2064 0.4181 MPVAKHKGFSTPDVMKADDGNDSLDTIIRQAIGKEPFLSFPRASDSPVQWIQLLNALDQQELPGWPLLSPVKVQLQKCEKCSREFCSPINYRRHIRFHHRLKKIDKDSTKNRELLGAYWDKLSVEEAKEVVSFKNVMLEEVPGSSILKELTALVRKQGLPSLPQYYLKAGSALLDIVQARSSFFPISSKELFSILDSASEKTFLCGTAVSMQKYIFDGELEKIGLEPKNLVACTSFLLEQKLVKAWLADKEAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKAREQGLEDEAEIKENGSSMVADGLLAEASLNTCAFEVHNLDTFADHVPTPPIPFQCADANEGVDGDSQSANDCGTDQNIEQQTSQGHIRQRIVAAQPKSQWTVANGFHASQNSQISKLGVIQKYGSHRDQRSAPVLNGNKVWSRKPKQKIVEVNSKARLEKEPDQCKNHEVLIGSISVTLGNCSQSEDSLVASREDFILGNLTKHSSSQEKQLKPDSVQNGNNRSTTKALKFWRPVSQHGTKYPLPLLSGGTEADTIDGKRDDKKLSEQSCLSSYDLGNSDIGFENNSSHLEDRVDPGCLQLSSQAAKAFLAERWKEAISSNHVKLVISPDSDPPGCQEIQDCELAACQSSNVDKCSTLASAENRPSATSAASKSKIRMKPEKGVKIKYIPKQRTVT 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1336 687 MobiDBLite consensus disorder prediction 493 521 - -
Dere06g1336 687 MobiDBLite consensus disorder prediction 533 555 - -
Dere06g1336 687 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Dere06g1336 687 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 685 - -
Dere06g1336 687 MobiDBLite consensus disorder prediction 649 670 - -
Dere06g1336 687 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Dere06g1336 687 MobiDBLite consensus disorder prediction 649 664 - -
Dere06g1336 687 Coils Coil 266 293 - -
Dere06g1336 687 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1336 Dere-ChrDere06 25711573 25718336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1336 19 684 C2H2 Transcription Factor Family AT4G25610 43.047 1.94e-150 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere06g1336 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1336 06 25711573 25718336 Dere06g1336 06 25711573 25718336 ECH