Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1332 ATGCCTTCATGGTGGGGGAAATCATCATCAAAAGAAACAAAGAAGAAAGGAAGTAAAGAAAGTTTCATCGACACATTACAAAGAAAATTTAAAATCCCATCTGAAGGTAAAGTAAGCAGTAGGTCTGGACGACCTTGTACGAACTGCAATGACACAATTTCAGAGAAGGGGGCTCAGTCCCCAGTTGAATCAAGATCTCCTTCGCCATCCAAAGTAGCAAGGTGTCAAAGTTTTGTTGAGAGGCCTCATGCTCAGCCACTACCACTTCCAAGCCGGCATCCTTCGTGTATAGGGCGAACAGATTCTGAAATTAGCATATCAACCAAGTCAAGAGTGCAGAAAAGCTCCAAGCCATCGTTGCATCTGCAACTTCCAAGACCTGCATGTATACGTAATAGTCTGAACCCTGCAGATTTGGATGGAGATCCTATCACCGCCTCTGTATCTAGTGAAAGTTCTGCTGATAGCGATGAGCCAGCAGACTCATGTCATCGTAGTCCCCTGGCAACTGACTCTGAGACTGGGACTAGAACTGCTGCCAGCAGCCCTTCCAGCTTGATGATCAAGGATCAATCATCTAATGTCTTGCAACTAAATTCAAGAGAAGCCAAAAAGCCAGCAAACATTCTGAGTAATCATATATCTCCTACATCACCAAAACGAAGACCTTTAAGCAACCATGTGCTGAATCTGCAGGTTCCTCCTCATGGTGCCTTCTTTAGTGCTCCTGACAGCTCCATGTCAAGTCCGTCAAGAAGTCCTTTGAGAGCATTTGGCACAGAACAAGTGCTGAGCTCTCCTTATTGGGCTGGAAAGCCATATTCGGAGGTCAATTTGATTGGATCTGGCCACTGCTCCAGTCCAGGTTCTGGTCACAACTCTGGGCATAATTCAATGGGAGGGGACATGACAGGACAGTTGTTATGGCAACCAAGCAGGGGTAGCCCCGAGTATTCTCCTGTTCCTAGTCCTAGGATGACTAGCCCTGGTCCAAGCTCTAGGGTTCAGAGTGGAGCTGTCACACCTATTCATCCTAGAGCTGGGGCAACACCCACTGAGTCACAAACCGGATGGGTTGATGAAGGAAAACAACAGAGTCATCCTCTGCCTCTTCCTCCTCTAACAATTAGCAATTCCTCTCCTTTCTCTCATTCAAATTCGGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGGAAGAGCAGATAATCCCTTGAGCCCTGGCTCCCGTTGGAAAAAGGGTAAGCTGCTGGGAAGAGGCACATTTGGACATGTCTATGTTGGCTTCAATAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACACTGTTTTCAGATGATGCCAAGTCCAAGGAAAGTGCTAAGCAATTAATGCAGGAAATTGCTCTTTTAAGCCGTTTACGGCATCCAAATATTGTGCAGTACTATGGTTCTGAAACAGTAGACGACAAGCTTTACATATACCTGGAGTATGTATCTGGTGGGTCAATATATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGCTATCCGCAATTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATCAGAATGGCCGGGTCATCAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACGGGGCAATCATGTCCATTGTCATTCAAGGGAAGTCCTTATTGGATGGCTCCTGAGGTCATAAAGAACTCTAGTGGTTGCAACCTTGCTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACTAAGCCTCCCTGGAGTCAGTATGAAGGGGTTGCTGCCATGTTTAAGATTGGTAATAGCAAGGAACTTCCAACAATCCCAGATCACCTCTCAAATGAAGGAAAGGATTTTGTTTGGAAATGTCTACAACGTAACCCACATGATCGTCCTTCAGCCCATGAACTACTGGACCACCCTTTTGTAAAATGTGCTGCACCTCTGGAAAGACCTATTCTGGGTCCTGAAGTGTTTGATCCTGTCTCTGGTATTGCACATGGAGCAAAAGCTCTGGGCGTTGGACAAGGAAGAAACACCTCTGGTTTGGATACAGATAGACTTTCTGCTCATTCTTCTAGGACGTTGAAAACTAATCCCCATGCCAGTGAAATCCATATTCCAAGGAATATATCTTGTCCAGTCTCTCCCATTGGAAGCCCACTTTTGCGGTCAAGATCACCACAGCACATGAATGGGAGAATGTCTCCCTCTCCTATATCTAGCCCTCGTACTGTTTCTGGTGCATCCACGCCTCTCACAGGTGGCAGTGGTGCCATTCCATTTGGTAATCATCTGATACAGTCAGCTTACTATCAACAGGGTCTTGGAAACTTGCCAAAGCACTCAAATGGTATCTACATCAGTGCCCCTGCCCATCATGACTCAAATGTTGACATGTTTCGTGCACCACAAATGGGGTGTAACACAGAATTGGTTCCTAGTGATAATGATGTTCTGGGGAAGCATTTTCCTAGGCCTCCTCCTGCGGAAGCCTATGATGTTCAGTCAGTCTTGGCTGATCGTGTTTGCCGGCAGCTGCTGGGGGATCATGCTAAGAGTAACCCATCCCTGGATCTGAGTCCCAACTCCCCTTTGCTCAGCCGGGCAAATGGTATATGA 2697 0.4587 MPSWWGKSSSKETKKKGSKESFIDTLQRKFKIPSEGKVSSRSGRPCTNCNDTISEKGAQSPVESRSPSPSKVARCQSFVERPHAQPLPLPSRHPSCIGRTDSEISISTKSRVQKSSKPSLHLQLPRPACIRNSLNPADLDGDPITASVSSESSADSDEPADSCHRSPLATDSETGTRTAASSPSSLMIKDQSSNVLQLNSREAKKPANILSNHISPTSPKRRPLSNHVLNLQVPPHGAFFSAPDSSMSSPSRSPLRAFGTEQVLSSPYWAGKPYSEVNLIGSGHCSSPGSGHNSGHNSMGGDMTGQLLWQPSRGSPEYSPVPSPRMTSPGPSSRVQSGAVTPIHPRAGATPTESQTGWVDEGKQQSHPLPLPPLTISNSSPFSHSNSAATSPSMPRSPGRADNPLSPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDQNGRVIKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVWKCLQRNPHDRPSAHELLDHPFVKCAAPLERPILGPEVFDPVSGIAHGAKALGVGQGRNTSGLDTDRLSAHSSRTLKTNPHASEIHIPRNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTVSGASTPLTGGSGAIPFGNHLIQSAYYQQGLGNLPKHSNGIYISAPAHHDSNVDMFRAPQMGCNTELVPSDNDVLGKHFPRPPPAEAYDVQSVLADRVCRQLLGDHAKSNPSLDLSPNSPLLSRANGI 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1332 898 MobiDBLite consensus disorder prediction 286 413 - -
Dere06g1332 898 FunFam Mitogen-activated protein kinase kinase kinase 409 691 - -
Dere06g1332 898 SUPERFAMILY Protein kinase-like (PK-like) 409 754 IPR011009 -
Dere06g1332 898 MobiDBLite consensus disorder prediction 200 224 - -
Dere06g1332 898 MobiDBLite consensus disorder prediction 9 35 - -
Dere06g1332 898 MobiDBLite consensus disorder prediction 348 362 - -
Dere06g1332 898 MobiDBLite consensus disorder prediction 286 313 - -
Dere06g1332 898 ProSiteProfiles Protein kinase domain profile. 411 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1332 898 MobiDBLite consensus disorder prediction 881 898 - -
Dere06g1332 898 Gene3D Transferase(Phosphotransferase) domain 1 409 678 - -
Dere06g1332 898 MobiDBLite consensus disorder prediction 167 185 - -
Dere06g1332 898 MobiDBLite consensus disorder prediction 753 775 - -
Dere06g1332 898 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Dere06g1332 898 MobiDBLite consensus disorder prediction 98 120 - -
Dere06g1332 898 MobiDBLite consensus disorder prediction 370 397 - -
Dere06g1332 898 Pfam Protein kinase domain 412 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1332 898 SMART serkin_6 411 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1332 898 MobiDBLite consensus disorder prediction 1 185 - -
Dere06g1332 898 CDD STKc_MEKK1_plant 410 668 - -
Dere06g1332 898 MobiDBLite consensus disorder prediction 40 73 - -
Dere06g1332 898 MobiDBLite consensus disorder prediction 877 898 - -
Dere06g1332 898 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1332 Dere-ChrDere06 25693044 25698680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1332 4 887 MAP Kinase Kinase Kinase AT1G63700 58.111 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere06g1332 Pkinase 2.2e-72 CL0016