Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1325 ATGGCATCCGAACTCCTGAAGCTGAAGATCACAGAGAAAAGCCATGTGAAGCCCAAGAGAAAGCTGGGGAGGAAGGAGTGTCAGCTCGTGACCTTTGATCTTCCATACCTGGCCTTCTACTACAACCAGAAGCTTCTGTTCTACAAAGGGGAGGACTACGAGGGGATGGTGAAGAAGCTGAAAGAAGGGCTCAGCGTGGTGTTGGAGGAATTTTATCAGCTCGCTGGTAGGATTGGGAAGGACGAAGAAGGGGTTTTCAGAGTGGAGTACAACGATGAAGATGATGAAGACGGTGGTTCTGCTGGTGTGGAGGTCACTGAAGCCGTGGCCGATGGTGAGATTGGAGTGGCGGATCTGACCGTCGCTGAAAGTACAAGCCTTTTGAGGGAGTTGATCCCTTATAGTGGGGTTCTCAATTTGGAAGGCATGCATAGGCCACTGTTGGCGATTCAGTTAACAAAGCTGAAAGATGGACTCGCAATAGGATGCGCGTTCAACCACGCAGTCCTTGATGGTACGTCCACGTGGCACTTTATGAGCTCGTGGGCTGCGGTCTGCAACGGTGCGCCGTCCGTTTCGGTATTGCCATTCGTCGAGCGAACCAAGTCACGAAACACGCGCGTGAAGCTGGACCTGTCCCACCCATCGGATCCACGGGTCGAATCCAACGGTGAAGCCAAGCAGGGCCCACCACTGAGAGAGAAGATCTTCAAGTTCTCCGAGTCCGCCATCGATAAGATCAAGTCAACAGTAAACTCCGGCCCTCCATCTGACGGCTCAAAACCATTCTCAACATTCCAGGCTCTCTCCGTTCACATTTGGCGCCATGTAAGCCATGCACGTAACCTGAAACCCGAAGACTACACTGTCTTCACCGTCTTTGTGGACTGCCGGAAACGGGTCGACCCACCGATGCCGGAGGCTTACTTCGGAAACCTTATCCAGGCGATATTCACGGTCACGGCTGCTGGGTTATTGACGGCGCAGCCGCCGCAGTTCGGTGCGTCGTTGATCCAGAAAGCCATTGAAGCACACGATGCCAAGGCCATTGATGAGCGTAACAAGGAGTGGGAGAGTGCACCCAAGATTTTCCAGTTCAAAGATGCTGGGGTGAACTGCGTGGCGGTCGGAAGCTCGCCGAGGTTTAAGGTGTACGATGTGGATTTCGGGTGGGGAAACCCAGAGAATGTGAGGAGTGGATCTAACAACAAGTTTGATGGGATGGTTTATTTGTATCCAGGGAAGAGTGGAGGGAGGAGCATTGACGTGGAGCTGACCTTGGAGAGTGAGGCTATGGCGAGGTTGGAGGAGGACAAGGAGTTTCTCATGGGACTTTGA 1338 0.5306 MASELLKLKITEKSHVKPKRKLGRKECQLVTFDLPYLAFYYNQKLLFYKGEDYEGMVKKLKEGLSVVLEEFYQLAGRIGKDEEGVFRVEYNDEDDEDGGSAGVEVTEAVADGEIGVADLTVAESTSLLRELIPYSGVLNLEGMHRPLLAIQLTKLKDGLAIGCAFNHAVLDGTSTWHFMSSWAAVCNGAPSVSVLPFVERTKSRNTRVKLDLSHPSDPRVESNGEAKQGPPLREKIFKFSESAIDKIKSTVNSGPPSDGSKPFSTFQALSVHIWRHVSHARNLKPEDYTVFTVFVDCRKRVDPPMPEAYFGNLIQAIFTVTAAGLLTAQPPQFGASLIQKAIEAHDAKAIDERNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDVDFGWGNPENVRSGSNNKFDGMVYLYPGKSGGRSIDVELTLESEAMARLEEDKEFLMGL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1325 445 Pfam Transferase family 7 441 - -
Dere06g1325 445 Gene3D - 3 214 IPR023213 -
Dere06g1325 445 MobiDBLite consensus disorder prediction 210 231 - -
Dere06g1325 445 FunFam Tryptamine hydroxycinnamoyl transferase 218 439 - -
Dere06g1325 445 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 442 - -
Dere06g1325 445 Gene3D - 215 437 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1325 Dere-ChrDere06 25604836 25608814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1325 6 437 Monolignol Biosynthesis Gene Families AT5G48930 26.608 2.83e-38 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1325 06 25604836 25608814 Dere06g1325 06 25604836 25608814 ECH