Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1308 ATGGCGACCCGAATGCTTGTTGCTATATCTTTAATCCTGATCGTTTTCTTTATTCGCTTCTCGTTTCCTTTCGTTCCTGCGGATAATTACCTACTCAACTGTGGATCACAAAGCAATGCTTCACTTTTCAACCGAGTATTCACAGGCGATTCCGCGAAACCCGGTTCGGATTTTCTCTCTGAGGGTAAATCCATTTCGCTTACGAACCAAAACCCACCTTCGAATTCGGCCACCCTGTATCGGACGGCCAGAGTTTTCACGAGCACGGCGAGCTACAGATTTGATATGAAGAGAAACGGTACCCACTTCGTACGTTTTCATTTCTCGCCCTTTTCCGCTCAAGGTTTTGATTTAAAATCCGCAAAGTTTAGTGTTCTGGTTAACGGAAATTCGCTTCTGAGCGAGTTTCAGTTACGTAATGGTACGTTAATTAAGGAGTACATACTGAAGATAGAATCAAATCTGCTTGAAATTTTGTTGAGACCTGTGGGTGATTCAGGTTTTGGATATGTCAATGCTTTGGAGGTTTTTACGGCTCCTGTGGACTTTATTATTGATTATGGAGCCAGGCTAGTGAGCTCTTCTGGCGTGGAAGAGTACAGAAACCTCTCGTCTCAGGTTTTAGAGACTGTTCATAGGATTAATGTTGGAGGCATGAAATTAACTCCTTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGATAATTATTTGGTATTCAAGGAAGCAGCTAAGCGTGCAGTGAGCACTCATACACCAAATTATCAGAAGGGAGGTGCCACTCGAGAGATCGCGCCTGATAATGTTTATATGACTGCCCAGGAGATGAATAAGGAAAACACAAGTCTGGCTTCAAGGTTCAATATAACCTGGAAATTTCCGGTGGCTCCTGGTGGTGTTCGACACTTGGTTCGATTGCACTTCTGTGATATTGTTAGCCCTGCACTTAACTTGCTGTACTTTGATGTGTATATCAATGGGTACTCTGCATATAAGGATCTTGATTTGTCATCTCTTACTGTTCATGTGCTTGCATCTCCAATCTATGTGGATTTTGTTGTGGATTCTGATGATTCAGGTGTTATTGAAATAAGCGTCGGTCCTTCTGATCTGAGCAGTTCTATGAGGATGAATGCCTTGCTGAATGGTGCAGAGATCATGAAGATGGTCAATATTATGGATTCAAATATTGTTCGTAGGAGAAAAAAGTTATGGGTACTGGTGGGTTCCGTTGTTGGAGGAGTCGTCTTATTACTTTTGGCAACGGTTGCCCTTCTTCTTGCCTTCAAGAGCAGGAAGAAGAAACCTAAACAAAGGGCGGTGGAAAGTGTAGGCTGGACACCTTTACGTATGTTTGGAGGGAGCTCACTTAGTCGAATGTCAGAAGCTCATCAATCTCCAGGTTCTCATGGATATTTAGGCTTGAAAATCCCTTTTACCGAAATACAAGTGGCAACAAACGATTTTGATAGAAGTCTGATTATAGGATCTGGTGGGTTTGGTATGGTTTTCAAAGCGGTGCTCAAAGATAACGTGAAGGTTGCTGTCAAGAGAGGTATGCCTGGGTCCAGACAGGGCCTTCCAGAGTTCCAGACTGAAATAGCAGTTTTATCCAAAATTCGCCATCGCCATCTTGTTTCACTCGTTGGTTTTTGTGAAGAAAATTCAGAAATGATACTAGTCTATGAGTACATGGAAAAAGGCCCACTTAAAAGGCATTTGTATGGTTCAGGACTACCACCTCTGTCTTGGAAGCAGCGTCTTGAAATATGCATTGGTGCAGCTAGAGGTCTTCACTATCTACACACTGGTTTTGCACAGGGAATCATCCACCGTGACATTAAATCAACTAACATATTGCTTGATGAAAATTATGTGGCCAAGGTTGCTGATTTTGGTCTCTCAAGATCTGGGCCATGTATTAATGAGACCCATGTGAGTACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTTCCGGAGACAGCAGCTAACAGATAAATCTGATGTTTATTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGCCAGACCTGCTGTTGATCCACAACTTGCTAGGGAACAGGTGAATTTAGCCGAATGGGCACTTGAATGGCAGAAGAAGGGCATGCTAGAGCATATTGTTGATCCCCATATTGTTGGGCAGATCAAATTTGACTCTTTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTGGCTGACTATGGTGTTGACAGGCCAACTATGGGTGATGTGTTATGGAATTTGGAATATGTACTTCAGATCCAAGAAGGTGGGCAACAAAGGGAACAAAATGCCAACCTGACAACTACAATTGTTCCTGGAATTCCTTCCAACAACATAAGAACAGAGGGCGATTATGATAATTGTAGTTCAGACATAAGTACGAGCCAAGTTTTTTCCCAGCTAATGACCAATGAAGGCAGATAG 2463 0.4251 MATRMLVAISLILIVFFIRFSFPFVPADNYLLNCGSQSNASLFNRVFTGDSAKPGSDFLSEGKSISLTNQNPPSNSATLYRTARVFTSTASYRFDMKRNGTHFVRFHFSPFSAQGFDLKSAKFSVLVNGNSLLSEFQLRNGTLIKEYILKIESNLLEILLRPVGDSGFGYVNALEVFTAPVDFIIDYGARLVSSSGVEEYRNLSSQVLETVHRINVGGMKLTPFNDTLWRTWIPDDNYLVFKEAAKRAVSTHTPNYQKGGATREIAPDNVYMTAQEMNKENTSLASRFNITWKFPVAPGGVRHLVRLHFCDIVSPALNLLYFDVYINGYSAYKDLDLSSLTVHVLASPIYVDFVVDSDDSGVIEISVGPSDLSSSMRMNALLNGAEIMKMVNIMDSNIVRRRKKLWVLVGSVVGGVVLLLLATVALLLAFKSRKKKPKQRAVESVGWTPLRMFGGSSLSRMSEAHQSPGSHGYLGLKIPFTEIQVATNDFDRSLIIGSGGFGMVFKAVLKDNVKVAVKRGMPGSRQGLPEFQTEIAVLSKIRHRHLVSLVGFCEENSEMILVYEYMEKGPLKRHLYGSGLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLAREQVNLAEWALEWQKKGMLEHIVDPHIVGQIKFDSLKKFGETAEKCLADYGVDRPTMGDVLWNLEYVLQIQEGGQQREQNANLTTTIVPGIPSNNIRTEGDYDNCSSDISTSQVFSQLMTNEGR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1308 820 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Dere06g1308 820 FunFam Putative receptor-like protein kinase 29 180 - -
Dere06g1308 820 Gene3D Transferase(Phosphotransferase) domain 1 566 784 - -
Dere06g1308 820 CDD STKc_IRAK 496 761 - -
Dere06g1308 820 Gene3D Phosphorylase Kinase; domain 1 457 565 - -
Dere06g1308 820 ProSiteProfiles Protein kinase domain profile. 490 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1308 820 FunFam Receptor-like protein kinase FERONIA 566 778 - -
Dere06g1308 820 FunFam Receptor-like protein kinase FERONIA 207 392 - -
Dere06g1308 820 Pfam Malectin-like domain 32 390 IPR024788 -
Dere06g1308 820 SUPERFAMILY Protein kinase-like (PK-like) 474 761 IPR011009 -
Dere06g1308 820 PANTHER OS07G0166700 PROTEIN 477 767 IPR045272 GO:0004714|GO:0006468
Dere06g1308 820 Pfam Protein tyrosine and serine/threonine kinase 495 687 IPR001245 GO:0004672|GO:0006468
Dere06g1308 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Dere06g1308 820 SMART serkin_6 490 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1308 820 Gene3D - 207 392 - -
Dere06g1308 820 Gene3D - 29 182 - -
Dere06g1308 820 FunFam receptor-like protein kinase FERONIA 456 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1308 Dere-ChrDere06 25448678 25451140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1308 6 820 Receptor kinase-like Gene Family AT3G46290 49.169 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere06g1308 Malectin_like 1.9e-34 CL0202