Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1292 ATGATTATACCGGAGAAGAATCGCAAGGAGATCTGCAAATACCTCTTCAAAGAGGGAGTATGTTATGCGAAGAAGGATTTTAATCTTGCAAAACACCCAGAGATCGATGTCCCAAATCTTCAGGTTATCAAGCTGATGCAGAGCTTCAAATCCAGGGAATTTGTTCGTGAGACTTTTGCTTGGATGCATTATTACTGGTTCCTCACAAACGATGGAATTGAGCATTTAAGGACATATCTTAATCTCCCATCTGAAATTGTGCCTGCTACCTTGAAGAAAACTCCTAAATCAACTGGCAGGCCATTTGGTGGCCCTCCTGGTGATCGCCCACGTGGTCCTCCTCGGTTTGAAGGAGGTTCAAGGTTTGGTGACCGTGATGGATACCGTGGAGGCCCTAGAGGGCCTCCTGGTGAGTTTGGTGGTGAGAAAGGAGGAGCTCCGGCAGACTTCCAGCCATCATTCAGGGGTCCTGGTGCAAGGCCTGGCTTTGGACGAGGTGGTGGAGGTTATGGCGCAGCACCCGGCTCCAGCTTCTCTTAG 540 0.4926 MIIPEKNRKEICKYLFKEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREFVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKTPKSTGRPFGGPPGDRPRGPPRFEGGSRFGDRDGYRGGPRGPPGEFGGEKGGAPADFQPSFRGPGARPGFGRGGGGYGAAPGSSFS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1292 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 174 IPR037447 -
Dere06g1292 179 MobiDBLite consensus disorder prediction 91 179 - -
Dere06g1292 179 MobiDBLite consensus disorder prediction 114 128 - -
Dere06g1292 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Dere06g1292 179 Gene3D - 1 104 IPR036388 -
Dere06g1292 179 FunFam 40S ribosomal protein S10 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1292 Dere-ChrDere06 25267807 25269799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1292 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.529 5.14e-76 223