Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1290 ATGTCTTCCGATACATCATCAACCATCAAAGCAACGCTCGCAAAATCAACCTCATTCTTCGGTGTTCCGTTATGGATTTTGCTTGTAGCTTCCACTGCAGCATTCATTGCTCTGGTAATTTTCGTTGCTCTCTGCATTTGCTTCATCTGCTGTCGTCACCATCGAAAACCCTACAAATCCCCATTTTCTTTGCCAAAACCAATTGCTTCCAAGCATTACCGTCGTCGTCACGATTTCAGCTCGTCGTCCTCCCTCGACAAGAGACTACTCTCCGCAAATAATAATCTCTCGGGAATTCTGTTGAAATTTGACAGGTGTTCCTCACAGGATGGAGATTTGAGTAATTTAGGATCGATTAGTAGGGGCTCTTATTGGGCTAGAAATGTTTTGCGACAGAGTAGGGAATTCAGCATGGAGGAGATCGCGGAGGCTACGAATGGATTGGCTAAAGAAAATGTGATTGGAAGTGGAGATCATGGAATAGTTTATCTCGGTTTGTTGCCGGATAATACTCGAGTGGCAGTGAAGAAGCTGGTGAGCGACAGTTGCCAACCTGAGGATTTTGCATTGCAAATGGAAGCAATTGGATGTGTAAAACACAAGAAACTAGTCAAGTTGCTTGGATATTGTACCGAGGGAGCTTGCAGGATGTCAGTATCTGAATACATAGATAATGGAAATCTGCATCAATGGCTGCATGAATTTCCAGGACAAGTCAGCCCTCTAACATGGGACACTAGATTGAAGATTATTCAAGGTGTAGCAAAAGGATTGGCGTACCTTCATGAGGACGTTGAACCAATGATTCTCCATGGAAGCCTAAAATCTAGCAATATATTGCTTGACCACCAATGGAATCCTAAGATCTCTGATTTTGGACTTGCTAACCTTTTCACTGCTAATTGGACTCCTAATATGATGGAAACATCAAGTTATGTAGGCCCAAAATGTCACCGTTTTACTGAGCGCAATGACATTTATAGCTTTGGAATACTTATAATGGAGATTGTGTCAGGGAGGATTCCTTTAGATCATAGTCAACCCCAGGCACATTTAATTGACTGGTTTAAGTCCAAAATTGCCAATGGAAATCTTGACTATCTGGTGCACTCAGAATTGCCCGAAATGCCTCCTTCCAAGGAACTTAAACGAATGATTTTAGTATCTCTTCTATGCATAGATCCTGATGTGAATCCGAAACTCAAAATGGGAGATGTCATTCGCATGCTTGAGCCACACGACCTGCTTCTTTCTGATGTAAGAACAACTAGTTATTCATTTCAGTTTGTAAAATTTGACTACTTTGACCTATTTTATAATTTCCTCTTACTTGTGTGA 1338 0.4141 MSSDTSSTIKATLAKSTSFFGVPLWILLVASTAAFIALVIFVALCICFICCRHHRKPYKSPFSLPKPIASKHYRRRHDFSSSSSLDKRLLSANNNLSGILLKFDRCSSQDGDLSNLGSISRGSYWARNVLRQSREFSMEEIAEATNGLAKENVIGSGDHGIVYLGLLPDNTRVAVKKLVSDSCQPEDFALQMEAIGCVKHKKLVKLLGYCTEGACRMSVSEYIDNGNLHQWLHEFPGQVSPLTWDTRLKIIQGVAKGLAYLHEDVEPMILHGSLKSSNILLDHQWNPKISDFGLANLFTANWTPNMMETSSYVGPKCHRFTERNDIYSFGILIMEIVSGRIPLDHSQPQAHLIDWFKSKIANGNLDYLVHSELPEMPPSKELKRMILVSLLCIDPDVNPKLKMGDVIRMLEPHDLLLSDVRTTSYSFQFVKFDYFDLFYNFLLLV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1290 445 FunFam Putative receptor-like serine/threonine-protein kinase 223 424 - -
Dere06g1290 445 Pfam Protein kinase domain 150 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1290 445 ProSiteProfiles Protein kinase domain profile. 148 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1290 445 Gene3D Transferase(Phosphotransferase) domain 1 223 421 - -
Dere06g1290 445 SUPERFAMILY Protein kinase-like (PK-like) 127 411 IPR011009 -
Dere06g1290 445 ProSitePatterns Protein kinases ATP-binding region signature. 154 177 IPR017441 GO:0005524
Dere06g1290 445 PANTHER OS01G0323000 PROTEIN 7 419 - -
Dere06g1290 445 Gene3D Phosphorylase Kinase; domain 1 119 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1290 Dere-ChrDere06 25254641 25258185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1290 3 406 Trihelix Transcription Factor Family AT1G68690 31.591 3.73e-56 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere06g1290 Pkinase 7.8e-33 CL0016