Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1250 ATGAAGAGTTCCCTTTTCTGTGTTGCAAAAAATAAGGCTTATGTTGCAATGCTTTTCATTCAGTTTGTGTATGCAGGCATGGCTTTGATGTCCAAGGCTGCAATTGCCAAGGGAATGAACCCTTTTGTGTTTGTTGTTTACCGGCAAGCTTTTGCCTCTCTTGCTCTGTCTCCGTTCGCTTTCTTCGACAGTAAACACGGTTCTCATCCCTTGTCATACAACTTACTGTGCAGAATCTTTCTAGTTTCCCTAGTTGGGTTAACACTAAGTTTAAACCTTTACTATGTTGCAATCAACTATACCTCTGCAACATTTGCTGCAGCCTCCACAAACACCGTCCCTGTCATTACTTTTATTATGGCTGCTATCATCAGGGTGGAAAGCATTTCCATAAAGCATGTGCATGGGATAGCCAAGATTTTTGGTTCTATCTTGTGCCTGTCTGGGGCAGTAATTTTTGCTTTGGTCAAAGGACCTCCCGTAGGTTTCATGAACTGGTATCCAGCAAACCCGCAGAATATTTCTCATTCATCAACAACTACAGGTCACTCTAAAGGAGATTGCATAAAAGGAACTATTATTATGCTCTCAGCAAACACTGCTTGGGCCTTGTGGCTTCTTTTGCAGGGCTTCATTGTAAAGCAATACCCTGCAAAGTTTCGCCTCACTACACTACAGTGCTTCTTTTGCTGCATACAATCAGCTGTCTTGGCTATCGCAATGGAGAGGAATCCTTCAGCATGGAAGCTTGGATGGGACATTCACCTTCTTGCTGTGGCTTACTGTGGTTTGATTGTAACAGGAATTGGCTATTGGCTCCAAGTGTGCACTATAGAGGAGAAAGGCCCAGTTTTTACAGCTATGTTCACCCCCATTTCTCTTGTAATCACTGCCATATTCTCAGCACTTATGTGGAGAGAAACTCTTCACTGGGGAAGCGTTGGTGGAACTATTTTATTGGTGGTTGGACTTTATAGTGTGCTGTGGGGGAAGAAGAGAGAAAGTGAAAAGGGCCAAAGCCATGGAAGCAGGCAAGAACCAAGTGAGGAAACCAGATTGGAATGCATTACACAGAAATGA 1080 0.4343 MKSSLFCVAKNKAYVAMLFIQFVYAGMALMSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFDSKHGSHPLSYNLLCRIFLVSLVGLTLSLNLYYVAINYTSATFAAASTNTVPVITFIMAAIIRVESISIKHVHGIAKIFGSILCLSGAVIFALVKGPPVGFMNWYPANPQNISHSSTTTGHSKGDCIKGTIIMLSANTAWALWLLLQGFIVKQYPAKFRLTTLQCFFCCIQSAVLAIAMERNPSAWKLGWDIHLLAVAYCGLIVTGIGYWLQVCTIEEKGPVFTAMFTPISLVITAIFSALMWRETLHWGSVGGTILLVVGLYSVLWGKKRESEKGQSHGSRQEPSEETRLECITQK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1250 359 MobiDBLite consensus disorder prediction 334 353 - -
Dere06g1250 359 MobiDBLite consensus disorder prediction 334 359 - -
Dere06g1250 359 Pfam EamA-like transporter family 13 148 IPR000620 GO:0016020
Dere06g1250 359 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Dere06g1250 359 PANTHER WAT1-RELATED PROTEIN 14 340 IPR030184 GO:0016020|GO:0022857
Dere06g1250 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 148 - -
Dere06g1250 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1250 Dere-ChrDere06 24438280 24441324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1250 12 347 Nodulin-like Gene Family AT2G39510 39.053 8.64e-81 249
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1250 06 24438280 24441324 Dere06g1250 06 24438280 24441324 ECH