Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1229 ATGGACCCCAAGTTCATCGGGAAGCCGCCGGTCACGGTGGACCTGGAGCAGATGCCGGACGCCCCACAGCGTGGGCCCCATCACCGTAGAGCCCACTCCGACACGTCCTTCCGCATCGCCAACTTCGATGAGCTCCTCCTCTTCGATCCTTCGGACCTCGACATCTCCAACCTCCCTTCGCCGGCGCTGCCCAACACAAACAACGCCTCCGCCGTCGCCCCTGTTGCTACAGCACACAGTGGCGGTGCGCCTGCAGCCATCGATTTGGCCTCGAAGCCGTCGGACGAATCCAACGGTCGGAATTCTCGGTCCAGGCCGGCGGTGTCCCCTATCGGCCACCTCCGGAGCTTGTCCATGGACTCTGATTTCTTCAACGACCTGGGGTTGACTGGCGGCGTCGACGGCGACAAATTTGGCGGGAAAGGTGTGGAAGAGAGAAGGGTGGGTCATCACAGGCACAGCAATTCTATGGATGAGTCATCGTCGCTGTCGTTTGAGGCCGACTCTACCATGGCGATCGACGGTGTGAAGAAGGCCATGGCTCCCGATAAGCTCGCTGAACTTGCTCTCGTTGATCCCAAGAGAGCTAGGAGGATTCTTGCTAATAGGCAATCTGCTGCTCGATCAAAGGAGAGAAAAATTCGGTATACAAATGAGCTGGAGAGGAAGGTACAGACGCTTCAGACTGAGGCAACTAACCTCTCTGCCCAGGTTACCATGCTTCAGAGAGACACTACAGGATTGACTGCTGAGAATAAGGAGCTTAAACTGCGCTTAGAGGCTATGGAACAACAGGCACAGCTTAGAGATGCTCTCAATGAAGCATTGAAGGAAGAACTGCAGCGCCTCAAGCTACAAAGCAGCCGTATGGCTGCTATGAACGGCAACCCTTCTTTTGGTGGGCTTCTTTCTCAATTCACTTCCCAGTTAGCTCTGCATCATCTTGCTAATCCTCCGTCCCAGCAGGCCCAACAGCAACCACAGCTTAGCATGCCTCCACCACCCTCCGATCAGCCTTTTAATGGGCAGGCAGGCCCTGACTTCCTGGACTTCAATCAGAAGAACTAG 1068 0.5562 MDPKFIGKPPVTVDLEQMPDAPQRGPHHRRAHSDTSFRIANFDELLLFDPSDLDISNLPSPALPNTNNASAVAPVATAHSGGAPAAIDLASKPSDESNGRNSRSRPAVSPIGHLRSLSMDSDFFNDLGLTGGVDGDKFGGKGVEERRVGHHRHSNSMDESSSLSFEADSTMAIDGVKKAMAPDKLAELALVDPKRARRILANRQSAARSKERKIRYTNELERKVQTLQTEATNLSAQVTMLQRDTTGLTAENKELKLRLEAMEQQAQLRDALNEALKEELQRLKLQSSRMAAMNGNPSFGGLLSQFTSQLALHHLANPPSQQAQQQPQLSMPPPPSDQPFNGQAGPDFLDFNQKN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1229 355 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 21 330 - -
Dere06g1229 355 Coils Coil 217 293 - -
Dere06g1229 355 MobiDBLite consensus disorder prediction 1 32 - -
Dere06g1229 355 Pfam Basic region leucine zipper 192 243 IPR004827 GO:0003700|GO:0006355
Dere06g1229 355 FunFam Transcription factor VIP1 193 246 - -
Dere06g1229 355 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 255 IPR004827 GO:0003700|GO:0006355
Dere06g1229 355 MobiDBLite consensus disorder prediction 312 355 - -
Dere06g1229 355 SMART brlzneu 190 254 IPR004827 GO:0003700|GO:0006355
Dere06g1229 355 Gene3D - 193 246 - -
Dere06g1229 355 SUPERFAMILY Leucine zipper domain 194 246 IPR046347 GO:0003700|GO:0006355
Dere06g1229 355 CDD bZIP_plant_RF2 195 244 IPR044759 GO:0003700|GO:0006355
Dere06g1229 355 MobiDBLite consensus disorder prediction 312 327 - -
Dere06g1229 355 MobiDBLite consensus disorder prediction 85 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1229 Dere-ChrDere06 23769671 23773941 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1229 11 332 bZIP Transcription Factor Family AT1G43700 50.299 1.45e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere06g1229 bZIP_2 1.9e-07 CL0018