Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1222 ATGAAGAAAAAGCTGAAAAAGGAAGGCAAAAAGAGAAAAAAAAGCTGTGGTGTCAGTTTTGGCGTGCAAAAGCTGAGCAACGTGGTGGGTTTTGCGAAAGCCTGGTGGGTCAGTTTTGGTGCTCCTGATTCAAAAACACACACTGGTATGCACTGCAACAACGGCAGTGGTGTCCCGGTTCTGCTGAACTTCTAGAGGTGGGGGAAAGGGAAGGTGATTAAAGTGCATGGTAAATGGCATGGGAAGAACTTGGATGAATTGGAGACCTGCGTCGTAGATGGTTGTGAGCTTAAGGCTGATAAAGGGTTGGGGCTACCCTATCCTTTGGAAGCAACTGGCGCTTCGTTCATAGAGGCTGAAAGAAAGCAAGGTGTCATGAGAGTGTTATGGGATTCAAACAGAATGGGGCTCGGTGCCATTGCTCAGGCAGAGTCTCTGCATTACAAGCTTCTTGGAGGGCTTGCTGTCCGAAGGGCTTGCTATGGTGTCCTTAGGTTTGTTATGGAAAGTGGTGCCAAAGGTTGTGAGGTTATTGTTAGTGGTAAGCTCAGGGCTCAGCGTGCCAAATCTATGAAATTCAAGGATGGGTACATGATATCATCCAATCAGCCTGTCAAGGAATATATTGACTAA 633 0.4692 MKKKLKKEGKKRKKSCGVSFGVQKLSNVVGFAKAWWVSFGAPDSKTHTGMHCNNGSGVPVLLNFXRWGKGKVIKVHGKWHGKNLDELETCVVDGCELKADKGLGLPYPLEATGASFIEAERKQGVMRVLWDSNRMGLGAIAQAESLHYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSNQPVKEYID 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1222 210 Gene3D - 135 210 IPR036419 -
Dere06g1222 210 SUPERFAMILY Ribosomal protein S3 C-terminal domain 135 206 IPR036419 -
Dere06g1222 210 Pfam Ribosomal protein S3, C-terminal domain 148 210 IPR001351 GO:0003735|GO:0006412
Dere06g1222 210 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 134 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1222 Dere-ChrDere06 23332172 23333157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1222 133 210 Cytoplasmic Ribosomal Protein Gene Family AT2G31610 89.744 4.39e-43 143