Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1215 ATGAATGAACCAGTGGCGGAGAACATGCCGACGAAGTTCATTCCAGCAAATTCCACAACGCTACTTCCAGCATTGAAGTTGTTCAGAGAAGAATACACCAAAATCCCAGAGAATGGAAATATGAGCCTTACCTTCCCTCAGCTCACTGGGGACTCAGAAGAAAACTTGGCTCAAGTGATCACTAGCTATGTGGAAACTTTATCTCATAGCAAAATGCACATTTTGGGCTACCCAACTAATCTAGACTTCGACTATGGAGCATTGGCACAGTTGCTGCATTTTCACATAAACAATGCTGGTGATCCATTTATGGGAAATTGCTTTGCTCTCAATTCAGCTTCTTTTGAAGTTTGTGTTCTTGATTGGTTTGCTAGCTTGTGGGAGATAAACAAGAATCACTACTGGGGTTACTTAACAACTGGTGGAACTGAAGGCAATCTTCATGGAATCTTAGTAGGGAGGGAACAATTACCAGATGGGATTCTATATACCTCAGAAGATTCTCATTATTCAGTGTTCAAAATAGCAAGAATGTACAGAATGCAATGTGTGAAGGTTGCTACTCTCACCTCTGGTGAGATTGACTGCGTTGATCTGAAGGCTTCACTTCTTGCTCACAAGGACAAACCAGCCATCATCAATCTAAACATAGGAACAACTATGAAAGGGGCTATTGATAATCTTGATCTTGTAGTACAAACGCTTGAAGAAAGTGGCTTTACACGTGATCAATTTTATATTCATTGTGATGGAGCTCTTTTGGGAATGATGCTTCCTTTCATTAAAGGAGCACCAAGGGTTAGTTTCACTAAACCCATTGGAAGCATAGCTATTTCAGGTCATAAGTTTTTAGGATGTCCTGTCCCTTGTGGGGTTATAATAACTCGTTTGAAATATATCGATGCCTTCTCTAGAGACATTGAAATTATTGCTTCAAAGGATGCCACAATCACAGGAAGTCGTAATGGGCATGCTCCAATCTTCCTTTGGTATTCTCTCAAGAAGAAAGGCTTAATAAGGCTGAAAGAAGAAGTGGAGAAATGCATAGAAAATGCTATTTACTTGCAAGATCAGCTACGACATGCTGGAATTGGAGCCATGAGGAATGAGTTTAGCAATACAGTAGTGTTTGAGAGGCCTCTAGATGATGGTTTTGCTCGTGAGTGGAGTTTGTCATGCAAAGGAAATATAGCACATGTTGTAGTGATGCAGCACGTGACCATTGAAATGTTGGACTCATTTGTCAATGAGTTTGTTCAAAGACGATCCATTAGGCTCAAAGATGAACAGAAGAATCAACCACTATGCATTGCAGACGAAATTAGTATCGGCAATTGTGCTTGTAAATTACACAACTTTGGAGCCTTTTGA 1371 0.4026 MNEPVAENMPTKFIPANSTTLLPALKLFREEYTKIPENGNMSLTFPQLTGDSEENLAQVITSYVETLSHSKMHILGYPTNLDFDYGALAQLLHFHINNAGDPFMGNCFALNSASFEVCVLDWFASLWEINKNHYWGYLTTGGTEGNLHGILVGREQLPDGILYTSEDSHYSVFKIARMYRMQCVKVATLTSGEIDCVDLKASLLAHKDKPAIINLNIGTTMKGAIDNLDLVVQTLEESGFTRDQFYIHCDGALLGMMLPFIKGAPRVSFTKPIGSIAISGHKFLGCPVPCGVIITRLKYIDAFSRDIEIIASKDATITGSRNGHAPIFLWYSLKKKGLIRLKEEVEKCIENAIYLQDQLRHAGIGAMRNEFSNTVVFERPLDDGFAREWSLSCKGNIAHVVVMQHVTIEMLDSFVNEFVQRRSIRLKDEQKNQPLCIADEISIGNCACKLHNFGAF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1215 456 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 275 296 IPR021115 GO:0016831
Dere06g1215 456 Pfam Pyridoxal-dependent decarboxylase conserved domain 54 363 IPR002129 GO:0016830|GO:0019752|GO:0030170
Dere06g1215 456 SUPERFAMILY PLP-dependent transferases 53 420 IPR015424 -
Dere06g1215 456 Gene3D - 92 333 IPR015421 GO:0003824
Dere06g1215 456 PANTHER - 47 452 - -
Dere06g1215 456 Gene3D Aspartate Aminotransferase, domain 1 334 422 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1215 Dere-ChrDere06 22888986 22891212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1215 174 357 Calmodulin-binding Proteins AT1G65960 25.907 2.14e-06 47.8