Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1195 ATGGCTAGCACTGCATCCTTCTTCACTTCGCTTCTGATCTCTTCCCTTCTATTTGCTTCCCACTTTTGTGCCAGTAAGGCACAGTCCAAGCCTCCCATAGTGCAGGGACTGTCATGGAGCTTCTACGAATCAAGCTGCCCCAACATTGAAACCATCGTTAGAGACCATCTCAAGACGGTGTTCAAGAACGACGTTGGCCAAGCTCCTGCCTTGCTTCGCATCTTCTTCCACGATTGCTTTGTTCAGGGGTGCGATGGGTCCATATTGCTGGATGCAATAGCACCGAGCAATGAGAGTGAGAGGACTCAGAGATCGAACGTGGGGATAAGGCCAGAGGCATTGAAGACGATTGACGATATCAGGGATCTGGTCCACAAGAAATGTGGAAGGGTTGTGTCCTGTGCTGACATTGTCGCTCTCGCCGGACGTGATGCCGTTGTTCTGTCCGGAGGGCCCAGCTTCCCAGTCCCACTAGGAAGACGAGACAGCCTAACCTTGAACATCGACGAAACGAGCAACCTCCCATCCCCTTTCGCCAACACCACCGGCACCATCGACACCTTCGCCGATCAGAAGTTTGACGTCACCGACGTGGTCGCCGTGTCGGGGGCCCACACCTTTGGCAGGGCCCACTGCGGCTCCTTCTCAGACCGCTTCACCGGCACGAGCCCCGCTCCTATCGACCAGACCCTCCTGAAGAACCTCAAGGCCACGTGTCCTTCCTCGTCCTCGCAGAACACTGCCAACCTGGACATCCGAACCCCCAACAAGTTCGACAACAAGTACTACATCGACCTCATGAACCGACAGGGCCTGTTCACCTCCGACCAGGATCTGTTCTCGGACTCTAGGACGAAGAAGTTGGTGCAGAGTTTTGCTCTGAACCAGAGCCTGTTCTTCGAGAAGTTTGCTAATGCTATGATCAAGATGAGCCAGCTTAGGGTTTTGACGGGGAAGCAAGGGGAGATTCGAGCCAAGTGTAATCTTAAGAATAGTGGAAAGAAGTCTTTGTTGGCTTCTGTGGTGGAAGAGGTGGTAAAAGTGGCCGAACAGTTATAG 1059 0.5345 MASTASFFTSLLISSLLFASHFCASKAQSKPPIVQGLSWSFYESSCPNIETIVRDHLKTVFKNDVGQAPALLRIFFHDCFVQGCDGSILLDAIAPSNESERTQRSNVGIRPEALKTIDDIRDLVHKKCGRVVSCADIVALAGRDAVVLSGGPSFPVPLGRRDSLTLNIDETSNLPSPFANTTGTIDTFADQKFDVTDVVAVSGAHTFGRAHCGSFSDRFTGTSPAPIDQTLLKNLKATCPSSSSQNTANLDIRTPNKFDNKYYIDLMNRQGLFTSDQDLFSDSRTKKLVQSFALNQSLFFEKFANAMIKMSQLRVLTGKQGEIRAKCNLKNSGKKSLLASVVEEVVKVAEQL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1195 352 FunFam Peroxidase 175 310 - -
Dere06g1195 352 Gene3D Peroxidase, domain 2 176 311 - -
Dere06g1195 352 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 FunFam Peroxidase 40 186 - -
Dere06g1195 352 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
Dere06g1195 352 Pfam Peroxidase 53 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 SUPERFAMILY Heme-dependent peroxidases 32 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 ProSiteProfiles Plant heme peroxidase family profile. 36 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Dere06g1195 352 CDD secretory_peroxidase 36 328 IPR033905 GO:0004601|GO:0042744
Dere06g1195 352 Gene3D - 41 328 - -
Dere06g1195 352 PANTHER - 17 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1195 352 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1195 Dere-ChrDere06 22482579 22484633 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1195 24 348 Peroxidase AT1G71695 53.659 4.50e-126 364