Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1187 ATGGGTTGCTTTCAGGCTAAGCCATTGGAGGGTTCAGAAGCGAGGGGCTTAGAGAGGTTGAAATTAGAACATGGGTATGTTGGAAAGGGCGACTTGATTGCTCATCGACGATTCATGGGTCAAAGATACGACGAACGCAGGGAAATTGGCAGGTCACACCATCGCGAAACCAGTAAGCATCGGGTTGGGTCTGTTAATGGAAACGAAGAAAGCGAAGTTGGCAGCAATGGCAGGGTACGGGAGGGGAAGGGGAAGAGAAATGCTGTGCATGATAATGAGAAATTATCAAGCAGGTCTTTCGATGATGAAATGGTTGATGGGTGGCCCAGATGGTTCGTTGATAATGTTCCTGGAGAAGTTTTGGCTGGCTTGGTTCCTAAGAGTGCTGAATCATACAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCACGAGATCGGCACACTGGAGAACTTGTGGCCCTCAAGAAGGTTCGCTTTGATACATCTCAGCCTGAAAGCATTAAATTTATGGCAAGAGAAATTACGATATTACAGAGATTGGATCATCCCAATGTAATAAAACTCAAAGGATTGGCTACATCAAGAATGCAATACAGTCTTTATCTTGTGTTTGATTTCATGCAATCAGACATGGCCAGAGTAATTTCTCGTCCTGAAGAAAGACTCACTGAACCACAGGTCAAATGCTATATGCATCAACTGCTTTCAGGTCTGCAGCATTGCCATGACAGGGGCATTTTGCACCGAGATATCAAGGGGTCAAACCTTTTGATTGATAAAAGTGGGATGCTTAAGATTGCTGATTTTGGGCTTGCCAATTTTTATAGTCCAAACCATAAGCGGCCTCTCACAAGCCGGGTTGTGACGCTATGGTACAGAGCTCCTGAGCTATTGTTAGGTGCCACAGATTATGGAGTTGGTATTGACCTATGGAGTGCTGGATGCCTTTTGGCAGAAATGTTCATAGGAATTCCAATTATGCCCGGCAGAACAGAGGTTGAGCAGCTTCACAGAATTTTCAGGTTGTGTGGCACTCCATCAGAGGAGTATTGGAGAAAATTGAATCTTTCTACAACATTTAGACCTCCAAAGTCTTACAGACCCAGCCTAATGGAATCCTTTAGGGATCTCCCTCCATCTTCGTTGGGCCTTTTATGTACTCTGCTTGCATTAGATCCTGCATATCGTGGCACTGCATCTAAAGCTCTTCAAAATCAGTTTTTCTGTATTAGTCCATTGGCATGTGACCTCTCTGGTCTGCCTGTAATCTACAGAGAAGATGATGAGCAAAATCTAGCTGATGAACAGATCAAGTACATGAACTCCAAAGTAAGACGATCTCGAACACTACACGTGCGTCAAAGGAAGAATCTGGCATCTGGTAGGCCAATTGAGCATACTGTATCTTCCAAAGAGGAATTGAGCAGGTATGTTGAGGTATGTGTCCCTAATGAAGAACAGGGTAGCAAAACCACAACCAATAGCACATCGCCTTTCTTTCTTTCTGCATATGCGGCTTCAGATGATCAAAACTTGCCCCCCAGATTCCATCATCATGGTAATGGTGAGGAAAACATCAAGAACCTTTCTCCATTATCCAAGTTAAAACTACATGCAGCCAAGAAAATAGACAACTATGGATCACACCAGGTCCTGAGATCTGCTTCCTCCAGAGAATTTAGAAACTCAAAACAGGGGGAGCATTTAGTCTTTGAAATTGATGATTAG 1746 0.4353 MGCFQAKPLEGSEARGLERLKLEHGYVGKGDLIAHRRFMGQRYDERREIGRSHHRETSKHRVGSVNGNEESEVGSNGRVREGKGKRNAVHDNEKLSSRSFDDEMVDGWPRWFVDNVPGEVLAGLVPKSAESYKMIDKVGQGTYSNVYKARDRHTGELVALKKVRFDTSQPESIKFMAREITILQRLDHPNVIKLKGLATSRMQYSLYLVFDFMQSDMARVISRPEERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKSGMLKIADFGLANFYSPNHKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFIGIPIMPGRTEVEQLHRIFRLCGTPSEEYWRKLNLSTTFRPPKSYRPSLMESFRDLPPSSLGLLCTLLALDPAYRGTASKALQNQFFCISPLACDLSGLPVIYREDDEQNLADEQIKYMNSKVRRSRTLHVRQRKNLASGRPIEHTVSSKEELSRYVEVCVPNEEQGSKTTTNSTSPFFLSAYAASDDQNLPPRFHHHGNGEENIKNLSPLSKLKLHAAKKIDNYGSHQVLRSASSREFRNSKQGEHLVFEIDD 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1187 581 ProSiteProfiles Protein kinase domain profile. 132 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1187 581 MobiDBLite consensus disorder prediction 47 93 - -
Dere06g1187 581 SMART serkin_6 132 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1187 581 FunFam Putative serine/threonine-protein kinase 215 452 - -
Dere06g1187 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Dere06g1187 581 FunFam probable serine/threonine-protein kinase At1g54610 119 214 - -
Dere06g1187 581 SUPERFAMILY Protein kinase-like (PK-like) 127 415 IPR011009 -
Dere06g1187 581 Gene3D Transferase(Phosphotransferase) domain 1 215 447 - -
Dere06g1187 581 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Dere06g1187 581 PANTHER CELL DIVISION PROTEIN KINASE 130 418 - -
Dere06g1187 581 Pfam Protein kinase domain 132 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1187 581 Gene3D Phosphorylase Kinase; domain 1 122 214 - -
Dere06g1187 581 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1187 Dere-ChrDere06 22397122 22404240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1187 127 504 Core Cell Cycle Gene Families AT5G10270 41.206 1.10e-94 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dere06g1187 Pkinase 1.9e-67 CL0016