Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1179 ATGGAAGTCGGAACGCCGACGGCAGTGTCGGCACCGACGACGCCGGGGACGCCGGCGCCGCTGTTCTCGTCGCAGCGAGTGGATTCTCTGTCTTACGATCGGAATTCAATGCCGCGGTGCAAGTGTTTGCCAACCAAGGCCCATTCATGTATCACTGATTTCTCTATTCCCAATGTATCTCTCGCGCGCAAGATTGGAGCAGAGTTTGTGGGGACTTTCTTGCTTATGTTTGCAGCATCAGCAGGACCCATCATAAACCAAAAATACAATGGAGCAGAGAGCCTAATTGGGAATGCAGCTTGTGCAGGGTTAGGTGTGATGATCGTAATCCTGTCCACAGGGCACATTTCTGGGGCCCACCTCAATCCGTCCCTCACCATCGCCTTCGCTACGTTTCGCCACTTTCCTTGGGTCCATGTCCCAGCTTATATAGCGGCTCAAGTCTCTGCCTCCATTTGTGCCTCTTTCGCTCTCAAGGGCATCTTCCATCCTTACATGTCTGGTGGTGTCACTATCCCTTCAGCGGGTACTAGTGTTGGACAGGCTTTTGCACTTGAGATCATCATCACTTTCAATCTCCTTTTTGTTGTCACTGCTGTCGCCACTGATACTCGTGCCGTTGGAGAATTAGCTGGAATTGCTGTTGGAGCCACAGTTCTGCTCAACATTCTAATATCAGGGCCGGCAAGTGGCGGTTCAATGAATCCGGTTCGCACCTTGGGTCCAGCCGTGGCTGCAGGAAATTTCAAGGATTTGTGGATATATCTGGTTGCTCCCACCCTCGGAGCTCTGGCCGGCGCTGGTGTTTATACTCTCGTCAAGCTCCACGACCATGAGGCCGACCCGCCACGCCAGGTCCAGAGTTTCCGTCGCTAG 876 0.532 MEVGTPTAVSAPTTPGTPAPLFSSQRVDSLSYDRNSMPRCKCLPTKAHSCITDFSIPNVSLARKIGAEFVGTFLLMFAASAGPIINQKYNGAESLIGNAACAGLGVMIVILSTGHISGAHLNPSLTIAFATFRHFPWVHVPAYIAAQVSASICASFALKGIFHPYMSGGVTIPSAGTSVGQAFALEIIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPASGGSMNPVRTLGPAVAAGNFKDLWIYLVAPTLGALAGAGVYTLVKLHDHEADPPRQVQSFRR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1179 291 MobiDBLite consensus disorder prediction 1 21 - -
Dere06g1179 291 SUPERFAMILY Aquaporin-like 59 283 IPR023271 -
Dere06g1179 291 MobiDBLite consensus disorder prediction 7 21 - -
Dere06g1179 291 Gene3D Glycerol uptake facilitator protein. 41 287 IPR023271 -
Dere06g1179 291 Pfam Major intrinsic protein 58 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g1179 291 CDD MIP 63 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g1179 291 FunFam Aquaporin NIP2-1 51 285 - -
Dere06g1179 291 PRINTS Major intrinsic protein family signature 253 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g1179 291 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g1179 291 PRINTS Major intrinsic protein family signature 139 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g1179 291 PRINTS Major intrinsic protein family signature 102 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g1179 291 PRINTS Major intrinsic protein family signature 63 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g1179 291 PRINTS Major intrinsic protein family signature 185 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g1179 291 PANTHER AQUAPORIN NIP2-1 36 279 IPR034294 -
Dere06g1179 291 ProSitePatterns MIP family signature. 120 128 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1179 Dere-ChrDere06 22209115 22215434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1179 21 291 Major Intrinsic Protein MIP AT4G10380 75.899 8.41e-153 427