Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1175 ATGACGGGGCGAGCACCAACCTCTTCTTCCTTCAATTATCAATGGACTTATGATGTTTTCATCAATTTTAGAGGTCAAGATACACGATATGGTTTTACGGGACATCTTTATAATGCATTTCGACAAAAGGGAATTCACGCCTTCATGGACGACGAGGAACTGAGAAAAGGGGACGAAATCACACCAGTACTTCTGAAAGCAATCGAAGAATCTAGGATGGCCATCACTGTATTCTCTAAGAACTATGCATCCTCAACATTTTGCCTCAGCGAACTTGTCAAGATTCATCAGTGTATTAAGGGAAACGGTCGGCTGGTTTGGCCAATTTTTTATGATGTGGAGCCATCTGAAGTACGACATCAGAAAGGGAATTACGAAGAATCACTGACTATGCATGTACAAAACTTCAAGGCTGATGAGGAAAAGATGCAAAGTTGGAAGCATGCGTTAAGTGAAGTAGCTAATTTATCCGGTTTACATATTATTCCTGGACAGAAATATGAGTATCAGTGCATTGAAAGTATTGTGAAAGAGATCTCAAGTAAGATCAATAGGATTCCGTTGCATATTGCTGATTATCCAGTTGGATTGAAGTCTCGAGTATCAAAAATGAACTCTCTTTTAGAAGTTGGAACATTAAACAACAAAGTCTACATGATAGGAATTTGTGGAATTGGGGGAGTGGGTAAAACAACAATTGCACGTGCTGTGTATAACTCAATTGCAGATCACTTTGAAGGATTATGCTTCCTCCACGACATCAAAGAATATTCAAATAAATTTGGCCTAAAATATATGCAAGAGAGAATGCTCTCAAAGATATTAGGTATAGATATCAAGGTGGAAGATGTTAATGAAGGAGTTTCAATCATAAAAAGGAGACTTGCTGAAAAAAAAGTTCTTTTGGTGCTTGATAATGTTGATGAAGGACAGCATTTACAAAAATTAGCCGGTAATTGTGATTGGTTTGGTTTAGGTAGCAGGATCATTATCACAACCAGGGATAAACAATTACTCATAAGCCATGGGATTGAAAGAATATTTTACATGAATGAATTCAACAGTGAAGAATCTCTTGAATTGTTGAAGTGGAAAGCCTTTAAAAGTAATCAAGTTGATCCAGCTTACATGGAAGTTTTAAATTCTGCAGTACAGTATGCCCATGGCCTTCCACTAGCACTTGAAGTGATAGGCTCACACTTGTTTCACAAGAGTATACAAGAGTGGAAATCTGCGTTAGATTTGTATAGAAGAATTCCTAATAATGATGTCCAGCAAATACTAAAAGTAAGCTATAATAGCTTGGAAGAAATCGAGCAAGAAATTTTCCTCGATATTGCATGCTTTTTCAAAGGAACAAGATTGAAATACATCAATGATATGGTAGAATATGTTTATGGTTTTGATCCATCTTATGTTATTGGAGTGTTGAAAGACAAATGCCTCATAAAGATTGGTCGTTATCTTGATTTTATTACAATGCACGACTTGATAGAGGGCATGGGGAGAGAAATTGTTCGTCAAGAATCACCAAGAGAGCCCGGAGAACGAAGTAGATTATGGTGCAATGAGGATATTATTCATGTTCTTGAAAACAATACTAATTGGAACAAAATGAGAGCTATGAATTTTAGTGGATGTCAATATATAACACAGGTCCCTGATGTATCTAGCATTCCAAATTTAATTGAACTGAAGATGAGGGAATGTCCTAATTTGATCGAAGTGGACAAGTCTGTCGGATATTTGGAAAATCTTCAAGTTTTAGATCTTTCTTGGTGTGAAAAGCTTAAGACTTTTCCAAGTGTCTTCAAGTTGCCCACTCTTAGAAATCTTGGACTTCAAGGTTGTTCAAGTCTTGAGAAATTTCCAGAAATACTAGAAGAGATGAAATATATGGAAGAGCTTTATTTGAGTTATACAAACTTAGAATTACCATATTCAATTTACAATATTACTGGACTACAGAACCTGATAATGTCTGAATGCAAAGGAGTAATTCTGGTACCAATGCTGAAACTAGAAGTGACATCTAGTGAAGGCTATGAAGAAGGCCAAGCAGAAGCGAGCTCCATGTTGTGTTCAAATGTGACACAGATTATACTTGAACAGTGCAATATATCAGATGAATTCCTTCCAATATGCCTTTCTTTGTTTGCCAATGTGAAACTCTTAGACCTATCTGATACTAATTTTATGATTTTGCCGGTGTGCATTAAAGAGTGTCGCTTCTTGCATACTCTCTATGTAAGGCGTTGCAAATATTTGAGAGAAATAAAAGGGATTCCGTCAAACTTACAGGAATTATGGGCAGAAGATTGCACAGCATTGAGTACTGAATCGAAAAGCATATTATTTAGTAAGGAATTACATGAGGTTGGAGGCAAAGAATTTTGTGTGATAGAATCAACGCTTCCAACATGGTTGGACAAGCGTAGCAGGAGACCGTCCATTTCCTTCTGGTTTCGCAACCAACTCCCATTGTTCTCTCTCTGGTTTCTTGGACAACAAATTACGATTTGTAATTCGAAGCACTTATCTGTGCTATGTTATGGTTGGGACCAGATATCATTGGATATTCTACCTACACCTCGGAAAGTTCAAACTACTGTTGAAATAAAGAAACCACAGTTTCTTAGTGAATGGAATCACGTGGAGATTTGCATCGATTTACTAGGACTTGATAATGGTGTTGTGAAAGAGATGGGAGTCCACGTAATAAGGAAACCAGAAAGTTGCATGGAAGATATCCGATTCACTCATCCTTATAAAAGGGCAAAATTTGATGACTTAAAATGGAATTCAAGTTTCGCGATTTCAACTTGGTCAAGTGGAAGTGGCACTCCTACTCTAACTGGTATTCTTCATTTTTCCCTGCATTATCTAAACCTTGCTTCTCTATCATATATCAAGATATTCTAA 2922 0.3689 MTGRAPTSSSFNYQWTYDVFINFRGQDTRYGFTGHLYNAFRQKGIHAFMDDEELRKGDEITPVLLKAIEESRMAITVFSKNYASSTFCLSELVKIHQCIKGNGRLVWPIFYDVEPSEVRHQKGNYEESLTMHVQNFKADEEKMQSWKHALSEVANLSGLHIIPGQKYEYQCIESIVKEISSKINRIPLHIADYPVGLKSRVSKMNSLLEVGTLNNKVYMIGICGIGGVGKTTIARAVYNSIADHFEGLCFLHDIKEYSNKFGLKYMQERMLSKILGIDIKVEDVNEGVSIIKRRLAEKKVLLVLDNVDEGQHLQKLAGNCDWFGLGSRIIITTRDKQLLISHGIERIFYMNEFNSEESLELLKWKAFKSNQVDPAYMEVLNSAVQYAHGLPLALEVIGSHLFHKSIQEWKSALDLYRRIPNNDVQQILKVSYNSLEEIEQEIFLDIACFFKGTRLKYINDMVEYVYGFDPSYVIGVLKDKCLIKIGRYLDFITMHDLIEGMGREIVRQESPREPGERSRLWCNEDIIHVLENNTNWNKMRAMNFSGCQYITQVPDVSSIPNLIELKMRECPNLIEVDKSVGYLENLQVLDLSWCEKLKTFPSVFKLPTLRNLGLQGCSSLEKFPEILEEMKYMEELYLSYTNLELPYSIYNITGLQNLIMSECKGVILVPMLKLEVTSSEGYEEGQAEASSMLCSNVTQIILEQCNISDEFLPICLSLFANVKLLDLSDTNFMILPVCIKECRFLHTLYVRRCKYLREIKGIPSNLQELWAEDCTALSTESKSILFSKELHEVGGKEFCVIESTLPTWLDKRSRRPSISFWFRNQLPLFSLWFLGQQITICNSKHLSVLCYGWDQISLDILPTPRKVQTTVEIKKPQFLSEWNHVEICIDLLGLDNGVVKEMGVHVIRKPESCMEDIRFTHPYKRAKFDDLKWNSSFAISTWSSGSGTPTLTGILHFSLHYLNLASLSYIKIF 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1175 973 Gene3D - 353 436 IPR042197 -
Dere06g1175 973 SUPERFAMILY L domain-like 494 779 - -
Dere06g1175 973 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 774 IPR044974 GO:0006952
Dere06g1175 973 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Dere06g1175 973 Gene3D - 13 179 IPR035897 -
Dere06g1175 973 Gene3D Ribonuclease Inhibitor 519 676 IPR032675 -
Dere06g1175 973 Pfam NB-ARC domain 215 438 IPR002182 GO:0043531
Dere06g1175 973 PRINTS Disease resistance protein signature 387 401 - -
Dere06g1175 973 PRINTS Disease resistance protein signature 294 308 - -
Dere06g1175 973 PRINTS Disease resistance protein signature 219 234 - -
Dere06g1175 973 PRINTS Disease resistance protein signature 581 597 - -
Dere06g1175 973 Pfam TIR domain 17 185 IPR000157 GO:0007165
Dere06g1175 973 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Dere06g1175 973 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Dere06g1175 973 SMART till_3 16 156 IPR000157 GO:0007165
Dere06g1175 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 446 IPR027417 -
Dere06g1175 973 Gene3D - 180 344 IPR027417 -
Dere06g1175 973 Gene3D Ribonuclease Inhibitor 686 793 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1175 Dere-ChrDere06 22049439 22053064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1175 11 773 WRKY Transcription Factor Family AT4G12020 26.179 6.31e-48 184