Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1171 ATGGCATTGCACTCTCACATGGAGAAAGTCTTATGGACTGAGGACCAAATCTCCCACCGAGTCTCTGAAGTCGCCTCCCTTATCTCCGACGACTTTCGCTCCGCTTCTCTGCTGCCCGTCGTTGTCGGCGTCGCCACCGGGGCCTTTATATTCTTGGCCGACCTCGTTCGCCAAATTGACCTCCCCATGCCCGTTGATTTTGTCCGAGCCCAATCCTATGGTTCCGGAACCCAGTCCAATGGCGCACCCACCATTTCCTTCGATTTGAAGGTTGACGTCAAAGACCGCCACGTGATTTTGGTTGAAGACATTGTAGATACTGGACACACTTTATCCTGTGTCATTGCACACTTGAAATCCAAAGGAGCATCCTCTGTTTCTGTTTGCACTTTCCTTGATAAACCAGCAAGGAGAAAGGTTGAGGTTAAGCTAGTGGGTAAGGGGAAGTTCTACTGTGGATTTGAGTGTCCAGACTACTTTGTTGTTGGTTATGGAATGGATTTTGCTGAACTATATAGGAACTTACCTTACATTGGTGTCTTGAAGCCTGAACATTACAAATGA 564 0.4787 MALHSHMEKVLWTEDQISHRVSEVASLISDDFRSASLLPVVVGVATGAFIFLADLVRQIDLPMPVDFVRAQSYGSGTQSNGAPTISFDLKVDVKDRHVILVEDIVDTGHTLSCVIAHLKSKGASSVSVCTFLDKPARRKVEVKLVGKGKFYCGFECPDYFVVGYGMDFAELYRNLPYIGVLKPEHYK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1171 187 Gene3D - 2 187 IPR029057 -
Dere06g1171 187 SUPERFAMILY PRTase-like 3 187 IPR029057 -
Dere06g1171 187 Pfam Phosphoribosyl transferase domain 22 168 IPR000836 -
Dere06g1171 187 NCBIfam hypoxanthine phosphoribosyltransferase 10 182 IPR005904 GO:0004422|GO:0006166
Dere06g1171 187 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 4 186 - -
Dere06g1171 187 CDD PRTases_typeI 21 155 IPR000836 -
Dere06g1171 187 FunFam Hypoxanthine phosphoribosyltransferase 2 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1171 Dere-ChrDere06 21970897 21973387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1171 1 186 PRT Gene Family AT1G71750 64.975 1.76e-90 261