Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1164 ATGGATATCAAAAATGGTTCTAAATCAAGTGAGCATCGCATGCCTCGTGTATCAGTATCAAAAAGTGCAGATTCATTACCTGATTCTGCATTGCGATCTTCTCCAAAGTCACCGAGATCCCGTAGTTCTCCAAGGTCCCCAAGGGCACATGCCAATAGCAGTAAGCAAAGTCCAAATCATGATAAGCAACCTCATTCTCCAAGAGATGGAAGTTCCAAGAAAGCTTATCAATCAGTTTCAGAAAGTGCAGATTCATTCACTGTTACTCCTCTGAAAATTTCTCCAAAGTCACCAACGTCTCCTAGTTCTCCAAGGTCCCCAAGGTTGCCAGGCCATAGTCCAAAGAATGAAAGGCAATCACGTTCGCCAAGAGATGGACGACCAAAGAAAGGAGGTTGTGGAGGGAAAGGCACATGGGGAGGATTGCTTGATACTGAGGACATGAACTTTCTTGACCCTCATGATCCAAACTATGACAGCACAGAGGAAATTGAACCTTCGAATGAAAAGAAAAAGAAGGGGGAGTTAGAGGAGTACAAGAAGAAAGCAACAATAATAGTGGAGGAATATTTTGCCACTGATGATATTGTTGCAACAAAAAATGAACTGAAAGAACTTGGAACACCATACTTTAGCTACTATTTTGTCAAAAAACTTGTCTCAATGTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTGTTCTGTTATCTGCACTTTATGCTGACACAATCGATGCTTCGCAAGTTTACAAAGGCTTCAGTAAACTAGTTGAATCTGCAGATGACTTGATTGTAGACATACCAGATGCAGTTGATGTTCTAGCACTTTTCTTGGCTCGAGCAGTGGTTGATGACATACTTCCTCCTGCATTTTTGAAGAAACAGATGGCTTACTTACCAAAAGATTCAAAAGGGGCTGAAGTCTTGAAAAAGGCTGAGAAAAACTATCTAGCAGCCCCTCTTCATGCTGAAATCGTAGAGCGCCGGTGGGGAGGCAGTAAGAATATGACAGTTGATGATGTGAAGGCTAGGATAAACAATTTGTTGATAGAATATGTGACAAGTGGTGACAAGAAAGAAGCCTTTAGATGCATTAAGGATTTGAAAGTTCCCTTCTACCACCATGAGATAGTGAAACGCGCTCTTATAATGGCAATGGAAAGGCGTCAAGCAGAAGGTCCCCTGCTAGATCTCTTGAAGGAAGCGACTGAAGAAGGCCTCATCAACTCGAGTCAAAACTCAAAGGGCTTTGATAGGTTGATTGACACTGTCGATGACTTATCACTTGACATACCAAATGCACGTGGAATACTCCAAAAGCTAATATCCAAGGCAGCATCTGAGGGTTGGTTGTGCGTTTCATCATTGAAATCACTCTCACAGGAACCAGAAAAACGATCACTAGGAGAAAATGCAGCCAGAAGTTTTAAGGTAAAGGCTCAGTCCATGATTCAAGAGTACTTCTTGTCAGGTGATATATTTGAAGTAATTAGCTGTCTTGAGCAAGAGAACAGCACTTGCTGTGCACAGCTGAATGCAATCTTTGTCAAAAGACTAATAACTCTAGCTATGGATAGGAAGAAGCGGGAGAAGGAAATGGCTTCAGTTCTGCTTTCATCTCTGTGTTTCCCAGCTGATGATGTAGTGAATGGTTTTGTTATGTTGATAGAGTCAGCAGATGACACTGCTCTGGACAATCCAGTAGTGGTGGAAGATCTTGCCATGTTTCTAGCTAGAGCAGTAGTGGATGAAGTCCTGGCCCCACAACATCTAGAAGAGATTGGAACACAGTGTCTAGGGCCAGATTCAATAGGAAGCAAAGTGCTTCAAATGGTAAAGTCATTGCTTAAGGCTCGGCTTTCAGGGGAGCGAATATTGAGGTGTTGGGGTGGAGGAGGAAGCAGCAGAACTGGGTGGGAAATTGATGATGTCAAGGACAAGATTATAAACCTGCTGGAGGAGTATGAATCTGGTGGTGACATAAGGGAAGCATGTTGCTGCATGAAAGAACTAGGAATGCCATTTTTCCACCACGAGGTTGTGAAGAAAGCTCTGGTGAAAATCATTGAGAAGAAGAATGAGAGGTTGTGGGGTCTTCTCAAGGAGTGCTTTGAGACTGGACTAATAACCATGAACCAGATGATGAAGGGCTTCGGAAGGGTTGCAGAATCTCTTGATGACTTGGCTTTGGATGTCCCTGATGCTAAGAAACAGTTTATATACTACATTGAACGAGCAAAGAGTTCAGAATGGTTGGATTCTTCATTTTGTCTCAGTAAATTTGAACATTCAGCATAG 2304 0.4245 MDIKNGSKSSEHRMPRVSVSKSADSLPDSALRSSPKSPRSRSSPRSPRAHANSSKQSPNHDKQPHSPRDGSSKKAYQSVSESADSFTVTPLKISPKSPTSPSSPRSPRLPGHSPKNERQSRSPRDGRPKKGGCGGKGTWGGLLDTEDMNFLDPHDPNYDSTEEIEPSNEKKKKGELEEYKKKATIIVEEYFATDDIVATKNELKELGTPYFSYYFVKKLVSMSMDRHDKEKEMAAVLLSALYADTIDASQVYKGFSKLVESADDLIVDIPDAVDVLALFLARAVVDDILPPAFLKKQMAYLPKDSKGAEVLKKAEKNYLAAPLHAEIVERRWGGSKNMTVDDVKARINNLLIEYVTSGDKKEAFRCIKDLKVPFYHHEIVKRALIMAMERRQAEGPLLDLLKEATEEGLINSSQNSKGFDRLIDTVDDLSLDIPNARGILQKLISKAASEGWLCVSSLKSLSQEPEKRSLGENAARSFKVKAQSMIQEYFLSGDIFEVISCLEQENSTCCAQLNAIFVKRLITLAMDRKKREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLEEIGTQCLGPDSIGSKVLQMVKSLLKARLSGERILRCWGGGGSSRTGWEIDDVKDKIINLLEEYESGGDIREACCCMKELGMPFFHHEVVKKALVKIIEKKNERLWGLLKECFETGLITMNQMMKGFGRVAESLDDLALDVPDAKKQFIYYIERAKSSEWLDSSFCLSKFEHSA 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1164 767 MobiDBLite consensus disorder prediction 70 99 - -
Dere06g1164 767 MobiDBLite consensus disorder prediction 1 175 - -
Dere06g1164 767 SUPERFAMILY ARM repeat 642 759 IPR016024 -
Dere06g1164 767 MobiDBLite consensus disorder prediction 111 131 - -
Dere06g1164 767 ProSiteProfiles MI domain profile. 342 463 IPR003891 -
Dere06g1164 767 SUPERFAMILY ARM repeat 175 336 IPR016024 -
Dere06g1164 767 ProSiteProfiles MI domain profile. 645 764 IPR003891 -
Dere06g1164 767 SUPERFAMILY ARM repeat 476 636 IPR016024 -
Dere06g1164 767 SMART ma3_7 478 589 IPR003891 -
Dere06g1164 767 SMART ma3_7 343 454 IPR003891 -
Dere06g1164 767 SMART ma3_7 179 290 IPR003891 -
Dere06g1164 767 SMART ma3_7 646 755 IPR003891 -
Dere06g1164 767 Pfam MA3 domain 180 290 IPR003891 -
Dere06g1164 767 Pfam MA3 domain 479 588 IPR003891 -
Dere06g1164 767 Pfam MA3 domain 647 755 IPR003891 -
Dere06g1164 767 Pfam MA3 domain 344 453 IPR003891 -
Dere06g1164 767 Gene3D - 629 761 - -
Dere06g1164 767 Gene3D - 329 461 - -
Dere06g1164 767 ProSiteProfiles MI domain profile. 477 598 IPR003891 -
Dere06g1164 767 FunFam programmed cell death protein 4 168 321 - -
Dere06g1164 767 MobiDBLite consensus disorder prediction 22 60 - -
Dere06g1164 767 Gene3D - 469 621 - -
Dere06g1164 767 Gene3D - 166 318 - -
Dere06g1164 767 MobiDBLite consensus disorder prediction 148 175 - -
Dere06g1164 767 MobiDBLite consensus disorder prediction 1 18 - -
Dere06g1164 767 SUPERFAMILY ARM repeat 338 461 IPR016024 -
Dere06g1164 767 ProSiteProfiles MI domain profile. 178 299 IPR003891 -
Dere06g1164 767 PANTHER PROGRAMMED CELL DEATH 4 77 758 IPR039778 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1164 Dere-ChrDere06 21895423 21898624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1164 637 741 Eukaryotic Initiation Factors Gene Family AT4G30680 29.630 2.58e-06 47.8