Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1147 ATGGAGACTCTCTCTGATTCCAAACTTACTGATACTAATCCTACTAAGCCAACTTCTCTTGAACTTGAGCCTGCAATCTCGCCAGAACCCAGTCCATTACGTAAGATTGTCGTCATCGCTTCCATCGCCGCCGGCATCCAGTTTGGCTGGGCCCTTCAGCTCTCCCTCTTAACCCCATATGTCCAACTCCTCGGCATCCCCCATACATGGGCCGCCTTCATCTGGCTCTGTGGCCCCATTTCCGGCATGCTCGTTCAGCCCATCGTCGGCTACCACAGCGACCGATGTAAATCTCGGTTTGGCCGCCGCCGTCCCTTCATTGCCGCCGGTGCCGGCTTCGTCGCTGTCGCCGTGTTTTTGATCGGCTACGCGGCGGACCTTGGCCACATGTTCGGCGACTCGCTTGGGAAGAAAACCCGGCCTCGTGCCATAGCGATATTCGTGGTCGGGTTCTGGATCCTCGACGTGGCCAACAACATGCTCCAGGGTCCGTGCCGGGCCCTCCTCGCCGACCTCGCCGCCGGTGACCAACGTAAGACTCGAACCGCGAACGCGTTCTTCTCGTTCTTCATGGCCGTCGGAAACGTCCTCGGCTACGCCGCCGGGTCTTACGGCCATCTCTACAAGATGTTCCCGTTCACAAAGACGAAAGCCTGCGACAAGTACTGCGCGAACCTCAAGAGCTGCTTCTTCCTCTCCATTGCGCTGCTAGTGACGCTGGCAACCATAGCCCTGACGTACGTGAAGGAGAAAACGGTGTCGTCGGGAGAGAAGACAACGAAAGAAGCCGGTGCTGCGGAGGAGGAGGAAGACGAAGAGGGATCAAGATCGTCACGAGGATTGCCTTGCATAGGGGAAATATTCGGTGCATTTCGGGAGCTGAAGAGGCCGATGTGGATCCTGCTTTTGGTGACGTGTCTGAACTGGATTGCGTGGTTCCCATTCTTGCTGTTCGACACTGATTGGATGGGGAAGGAAGTGTACGGAGGAAAGGTAGGAGAAAGTGCGTACAATATGGGGGTGCGCGCAGGTGCATTGGGGCTCATGCTGAACTCGGTGGTGCTGGGAGTAACGTCGTTGAGCGTGGAGGTGTTGGCGCGTGGGGTTGGGGGCGTCAAGAGGCTCTGGGGAATCGTGAACTTCGTGCTCGCTATCTGTTTGGCGCTCACGGTGCTGATCACTAAGCTCGCCGAGCACTCGCGGCGGTTCACCGTCGGCCACAGCGGCACTATGGGGCCGCTGCCACCATCCGCCGGTATCAAGGGTGGCGCGTTGGCTCTCTTTGCGGTCCTGGGAATTCCCCTTGCGATTACTTTCAGCATCCCTTTTGCTCTTGCATCTATATTCTCCAACACCTCTGGGGCAGGCCAAGGGCTATCTCTGGGAGTTCTCAATCTTGCAATTGTGATACCACAGATGGTGATTTCTGTGGTGAGTGGACCATGGGATGCCTTATTTGGTGGTGGCAACTTGCCAGCATTTGTGGTGGGCGCGGTGGCAGCTGCGATCAGTGGTGTATTATCAATAGTCTTGCTGCCGTCTCCACCGCCGGATATAGCCAAAACTGCGTCGGTGGTGGCCGGAGGGTTCCATTAA 1596 0.5702 METLSDSKLTDTNPTKPTSLELEPAISPEPSPLRKIVVIASIAAGIQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCKSRFGRRRPFIAAGAGFVAVAVFLIGYAADLGHMFGDSLGKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANAFFSFFMAVGNVLGYAAGSYGHLYKMFPFTKTKACDKYCANLKSCFFLSIALLVTLATIALTYVKEKTVSSGEKTTKEAGAAEEEEDEEGSRSSRGLPCIGEIFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGKVGESAYNMGVRAGALGLMLNSVVLGVTSLSVEVLARGVGGVKRLWGIVNFVLAICLALTVLITKLAEHSRRFTVGHSGTMGPLPPSAGIKGGALALFAVLGIPLAITFSIPFALASIFSNTSGAGQGLSLGVLNLAIVIPQMVISVVSGPWDALFGGGNLPAFVVGAVAAAISGVLSIVLLPSPPPDIAKTASVVAGGFH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1147 531 PANTHER SUGAR TRANSPORTER 33 511 - -
Dere06g1147 531 CDD MFS_SLC45_SUC 36 491 - -
Dere06g1147 531 MobiDBLite consensus disorder prediction 1 26 - -
Dere06g1147 531 MobiDBLite consensus disorder prediction 1 20 - -
Dere06g1147 531 MobiDBLite consensus disorder prediction 258 278 - -
Dere06g1147 531 Pfam MFS/sugar transport protein 42 261 - -
Dere06g1147 531 SUPERFAMILY MFS general substrate transporter 34 517 IPR036259 -
Dere06g1147 531 NCBIfam sucrose/proton symporter 32 517 IPR005989 GO:0005886|GO:0008515|GO:0015770
Dere06g1147 531 Gene3D MFS general substrate transporter like domains 29 524 IPR036259 -
Dere06g1147 531 FunFam Sucrose transport protein 30 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1147 Dere-ChrDere06 21609658 21612341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1147 18 531 Sucrose Transporter Gene Family AT1G22710 67.562 0.0 691