Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1134 ATGGGCAGGTATGAGTATACTACGCCTTTCCTCTTTGTTTCTCTGTGCTTTTGGTTCTGTCCAATGGTGTTGTGTCAGCTATCCCAGAACCAAACCAAAACCATGACCACTTTCTCCCAGCATCTTGATGGAACTGGATTAGCTAGTTCATGGAATATTGCCAAGGAACCAAATCCGTGTAAATGGCGTGGAGTCACTTGCGACCACACCAATTCTTCTATTATCATGCTTATGTTATCTGGGTCTTCCCTCTCTTCTTCCACATTTCTGTCGTTTCTTTGCCAAATTGAAACTTTGGAGCATCTTGATCTCTCTAATAACCAGCTTACCTCAATCCCAGACGATTTCATCGCTGATTGTGGCAAGATTAAGGGGTTGAAGCTGCTCAATTTTAGTAAAAACACGATGGAAGGTCCTTTGCCTACTTTTCTGGGCTTTGACGGGTTAGAATCCCTGGATATGTCTTTCAATAACTTCCATGGGAAAATTGATTCACAGTTAGCTGGATTAGCGAGTCTTAAGAACTTGACTCTCAGTAATAATTTCTTCAATGGGTCTCTTCCTACCAAGCTAGGGAATTCCATGGCTTTGGAGCAGCTAGTGCTGTCTGTTAATGAATTTGAAGGAAAAATCCCAGATGAAATGTTGAGTTATAAGAATTTGGCTTTGATTGATCTTAAAGGAAATAATCTTTTGGGTTCTATTCCCAGCAACATTGGAAATCTATCCAAATTGAATACTTTAATTCTTTCCTCCAATTCACTCGACGGGGAAATCCCTACAACACTTCTGAACATCACAACCCTCACCCGTTTTGCAGCCAATTCAAACAATTTTAGGGGTTCTGTTCCCAGTGGAATTACAAAATCTCTCAGGAGTTTGGATCTTAGTTATAATAGGTTGTCTGGGCCAATTCCAAGAAACCTTCTATCAAAATCAAATTTGGAGGTTTTGGATTTGTCGTATAATGAGTTATCTGAATCGTTACCTGCAAACATATCTTCTAGCATGGTTAGGTTGAGACTGGGGGGCAATAGGCTGACTGGGATGATATCTTCAGTGGATTTTGCAACGCTTCAGAACATGATGTACATGGAGCTTGAAGGCAATAACTTGACAGGCTCAATACCAGCTGAAGTGAGTTCTTGCCAGAAATTGGCCTTGTTGAACTTTGCTCAAAATCAACTATCTGGGAGTCTGCCGGCAGAGCTTGGTAACCTTAGCAATCTTCAAGTGTTGAAGCTGCAAATGAATCAGTTTTCCGGACAAATTCCATTAGAAATTGGCCGACTCCAAAATTTATCATCACTGAATTTGAGCTCCAATTCCCTGAGTGGTGCCATTCCCTCTGCTATGTCCAGTTTGTCAAAACTAAGTAATTTGTACTTGCAACAGAACAATCTCACTGGCTCTATCCCCTCCTCCATTGGCCACATGGTATCTCTCATTGAGCTCCAACTTGGGGAAAACCAGCTAAGTGGTGATATTCCTAGAATGCCATGGAATCTACAGATTGCCTTGAATCTCAGTGGCAATCTCTTTACAGGACCTATTCCTACTAGTCTTGCTGATTTGGCTAACCTGGAAATTTTGGACCTCTCAAATAACAAATTTTCTGGTACAATTCCTGATTTTTTAACTAAAATGGTGGCTTTGACACAGCTGGTACTTTCTAACAATCAGCTGTCTGGTGTTTTTCCTGAATTTAGTTCTCATGTCAAAGTTGAATCACGTGGAAATAAGGATCTCATACATCCTACTGCACCATCCAACACTTCCCCAAGATCAGCAAAGAAGGGCAATTCTGTAGTTGTGGCAGTTCTTGTTGCCATTGCAGCAGCTGTTTTTCTTGTTGGCCTGGTCACTCTGCTGGTTGTATCAATCTCTCGTCGCTTATATAGGGTTAATGATGAACACTTACAGCCACACGAGGATCCTCAACTCCCTCAGGTCATTCAAGGTAACTTGTTAACTCCAAATGGAATTCACAGATCAAACATTGATTTCTCAAAGGCCATGGCAGATGTAGCTGTATCATCAAACATTACACTGAAAACAAGGTTTTCAACTTATTATAAGACCATTATGCCATCTGGATCAATCTATTTTGTCAAGAAGCTTAACTGGAGCGACAAGCTATTCCCACTGGGCAGTCATGATAAATTTGGTAAAGAGCTAGAGGTCTTGGCAAAATTGAACAATTCAAATGTCATGACTCCTTTAGCTTATGTTCTGTCCACTGAAAGTACTTATATATTGTATGAATTTATCTCAAATGGCTCTCTTTATGAAGCTCTTCATGGAAGCATGGAGAACTCTTTAGATTGGGCTAGCAGATATAGTATAGCAGTTGGGGTGGCTCAAGGTCTCTCTTTTCTGCATGGATTTGCCTCTGGTCCAATACTTCTCCTTGATCTATCAAGTAAAAGTATTATGCTCAAGTCCCTCAAGGAGCCTCTAGTTGGGGATATTGAACTCTATAAGGTGATTGATCCCTCGAAAAGTACAGGAAGTTTTTCTGCAGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAGTATGCATACACAATGAGAGTAACCACGGCTGGGAATGTGTACAGCTTCGGGGTGATCCTGCTCGAATTGCTGACTGGAAAACCTGCAGTGACTGATGGCACTGAATTGGTCAAGTGGGTATTGCGCAACTCGACCAAGCCGGATCACATTCTGGATTTTAATGTCAGTAGAACTTCACAGGCTGTCAGAAACCAGATGCTTGCAATCCTTCGGATTGCTCTTGTTTGTGTCAGTACATCCCCTGATGGAAGACCGAAGATGAAGAGTGTACTACGGATGCTTCTGAATGCACGATAA 2853 0.4154 MGRYEYTTPFLFVSLCFWFCPMVLCQLSQNQTKTMTTFSQHLDGTGLASSWNIAKEPNPCKWRGVTCDHTNSSIIMLMLSGSSLSSSTFLSFLCQIETLEHLDLSNNQLTSIPDDFIADCGKIKGLKLLNFSKNTMEGPLPTFLGFDGLESLDMSFNNFHGKIDSQLAGLASLKNLTLSNNFFNGSLPTKLGNSMALEQLVLSVNEFEGKIPDEMLSYKNLALIDLKGNNLLGSIPSNIGNLSKLNTLILSSNSLDGEIPTTLLNITTLTRFAANSNNFRGSVPSGITKSLRSLDLSYNRLSGPIPRNLLSKSNLEVLDLSYNELSESLPANISSSMVRLRLGGNRLTGMISSVDFATLQNMMYMELEGNNLTGSIPAEVSSCQKLALLNFAQNQLSGSLPAELGNLSNLQVLKLQMNQFSGQIPLEIGRLQNLSSLNLSSNSLSGAIPSAMSSLSKLSNLYLQQNNLTGSIPSSIGHMVSLIELQLGENQLSGDIPRMPWNLQIALNLSGNLFTGPIPTSLADLANLEILDLSNNKFSGTIPDFLTKMVALTQLVLSNNQLSGVFPEFSSHVKVESRGNKDLIHPTAPSNTSPRSAKKGNSVVVAVLVAIAAAVFLVGLVTLLVVSISRRLYRVNDEHLQPHEDPQLPQVIQGNLLTPNGIHRSNIDFSKAMADVAVSSNITLKTRFSTYYKTIMPSGSIYFVKKLNWSDKLFPLGSHDKFGKELEVLAKLNNSNVMTPLAYVLSTESTYILYEFISNGSLYEALHGSMENSLDWASRYSIAVGVAQGLSFLHGFASGPILLLDLSSKSIMLKSLKEPLVGDIELYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTTAGNVYSFGVILLELLTGKPAVTDGTELVKWVLRNSTKPDHILDFNVSRTSQAVRNQMLAILRIALVCVSTSPDGRPKMKSVLRMLLNAR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1134 950 Pfam Leucine rich repeat 98 159 IPR001611 GO:0005515
Dere06g1134 950 Pfam Leucine rich repeat 433 492 IPR001611 GO:0005515
Dere06g1134 950 Pfam Leucine rich repeat 507 562 IPR001611 GO:0005515
Dere06g1134 950 SUPERFAMILY L domain-like 58 374 - -
Dere06g1134 950 SMART LRR_typ_2 455 479 IPR003591 -
Dere06g1134 950 SMART LRR_typ_2 549 572 IPR003591 -
Dere06g1134 950 SMART LRR_typ_2 407 431 IPR003591 -
Dere06g1134 950 SMART LRR_typ_2 170 194 IPR003591 -
Dere06g1134 950 SMART LRR_typ_2 288 312 IPR003591 -
Dere06g1134 950 SMART LRR_typ_2 525 548 IPR003591 -
Dere06g1134 950 SMART LRR_typ_2 242 266 IPR003591 -
Dere06g1134 950 SMART LRR_typ_2 313 336 IPR003591 -
Dere06g1134 950 SMART LRR_typ_2 96 119 IPR003591 -
Dere06g1134 950 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 190 283 - -
Dere06g1134 950 PRINTS Leucine-rich repeat signature 525 538 - -
Dere06g1134 950 PRINTS Leucine-rich repeat signature 99 112 - -
Dere06g1134 950 SMART serkin_6 681 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1134 950 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 645 756 - -
Dere06g1134 950 ProSiteProfiles Leucine-rich repeat profile. 527 549 IPR001611 GO:0005515
Dere06g1134 950 Gene3D Phosphorylase Kinase; domain 1 670 756 - -
Dere06g1134 950 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 325 593 - -
Dere06g1134 950 Pfam Leucine Rich Repeat 314 332 IPR001611 GO:0005515
Dere06g1134 950 Pfam Leucine Rich Repeat 290 309 IPR001611 GO:0005515
Dere06g1134 950 SUPERFAMILY L domain-like 335 572 - -
Dere06g1134 950 Gene3D Ribonuclease Inhibitor 188 287 IPR032675 -
Dere06g1134 950 Gene3D Transferase(Phosphotransferase) domain 1 757 950 - -
Dere06g1134 950 PANTHER LEUCINE RICH REPEAT KINASE 2 72 212 - -
Dere06g1134 950 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Dere06g1134 950 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Dere06g1134 950 ProSiteProfiles Protein kinase domain profile. 677 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1134 950 Pfam Protein tyrosine and serine/threonine kinase 719 945 IPR001245 GO:0004672|GO:0006468
Dere06g1134 950 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Dere06g1134 950 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 29 189 - -
Dere06g1134 950 SUPERFAMILY Protein kinase-like (PK-like) 688 946 IPR011009 -
Dere06g1134 950 FunFam leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 757 950 - -
Dere06g1134 950 Gene3D Ribonuclease Inhibitor 288 594 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1134 Dere-ChrDere06 21399322 21402661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1134 149 950 Receptor kinase-like Gene Family AT2G41820 39.115 2.69e-161 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere06g1134 PK_Tyr_Ser-Thr 4.4e-22 CL0016