Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1130 ATGAGTCCTCCAAAGAAGTACAGTAAGCAACAAAACCTTGAAGTGAAACTACCCACTAAGGAAGAAGACGACCAGGCATGCCTCTACGCCATGCTCCTATCGAGCTTCCAAGTGTTCCCTGCGATTCTGAACGCAGCCATAGAGCTGAAGGTGTTGGACATAATAGCAGAGAGAGCAGCAGCACCTGGTGTGTTCTTGACAGTATCTGAGATTGCTTCTGAGTTTCCCACACAGCACTCTGAGCTGCACAACAGGCTTGACCGAATGCTGCGTGTGCTCGCCACTTTCAAGGTTCTGGATTGGACCACTCGCACCAATGAAGATGGCGAGGTTGAGAGGCTGTATAGGGTCTCTCTCGCTGGGAATTACTTTCTGCAGAATGAAACTGAGAGCTTCGCTTCGTTCTCTAACCTCAACTGCCATCCTGCTACTGCAAAGGTTTGGCTGAACATAAAGGAGGCTATTCTGGATGGAGGAGTAGACCTATTCAACAAAGTACATGGAATAACCATGTGGAAATACATGGAGAAGGACACAGAACTGAACCACACATTCAACAAGGCAATGGCAGGAATCTCAGCAATACAGATGAGGAAGTATCTGGAAGTGTATGATGGATTTGAAGGAGTTTCAACCTTAGTTGATGTGGGAGGAGGCACTGGGCAGAGTCTCAAAATGATAATCTCCAAGCACCCTCATGTCAAGGGTATCAACTTTGACTTGCCCCAAGTCATACAACATGCCCCTCCCTTTCCAGGAATCAAGCATGTTGGAGGGGATATGTATGAAAGTGTTCCAAAGGGTGATGCCATTATGGTAAAGGCTACTTGTCATAATTGGTCAGATGAAAAATGCGTAGCACTTCTGAAGAACTGTTACAAAGCACTTCCGCAGAATGGGAAGGTGATTATTCTGGACATGATAATGCCTGAAGAACCAGAGTCAAGTGATGCTTTTAAGTACGTCTCCATTGTAGACAACTCCATGTTTATTCAAGCTGGAGGGAAAGAAAGAACTGAGAAACAGTTCCAGAAGCTCTGCAAACTCTCTGGATTCTCAAGCATGCGTGTGGCTTCCCGTGCTCTCTCGGTTTATGGTGTCATAGAGTTTTATATGTAA 1119 0.4576 MSPPKKYSKQQNLEVKLPTKEEDDQACLYAMLLSSFQVFPAILNAAIELKVLDIIAERAAAPGVFLTVSEIASEFPTQHSELHNRLDRMLRVLATFKVLDWTTRTNEDGEVERLYRVSLAGNYFLQNETESFASFSNLNCHPATAKVWLNIKEAILDGGVDLFNKVHGITMWKYMEKDTELNHTFNKAMAGISAIQMRKYLEVYDGFEGVSTLVDVGGGTGQSLKMIISKHPHVKGINFDLPQVIQHAPPFPGIKHVGGDMYESVPKGDAIMVKATCHNWSDEKCVALLKNCYKALPQNGKVIILDMIMPEEPESSDAFKYVSIVDNSMFIQAGGKERTEKQFQKLCKLSGFSSMRVASRALSVYGVIEFYM 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1130 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 372 IPR016461 GO:0008168
Dere06g1130 372 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
Dere06g1130 372 PIRSF O-mtase 7 372 IPR016461 GO:0008168
Dere06g1130 372 FunFam Caffeic acid O-methyltransferase 126 372 - -
Dere06g1130 372 Gene3D - 7 124 IPR036388 -
Dere06g1130 372 Pfam O-methyltransferase domain 148 353 IPR001077 GO:0008171
Dere06g1130 372 FunFam Caffeic acid 3-O-methyltransferase 8 124 - -
Dere06g1130 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 370 IPR029063 -
Dere06g1130 372 SUPERFAMILY "Winged helix" DNA-binding domain 21 127 IPR036390 -
Dere06g1130 372 PANTHER O-METHYLTRANSFERASE 30 352 IPR016461 GO:0008168
Dere06g1130 372 Pfam Dimerisation domain 42 94 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1130 Dere-ChrDere06 21359562 21362578 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1130 18 364 Monolignol Biosynthesis Gene Families AT5G54160 47.564 7.58e-110 324