Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1129 ATGAGTTCCACAGAGAACAGTGAGCAAAACCTTGAGGTGAAGCCAGCCACTAAGGAAGAAGACGACCAGGCATGCCTCTACGCCATGCTCTTATCCAGCTTCCAAGTGTTCCCCGCAATTCTGAACGCAGCCATAGAGCTGAAGGTGTTGGACATAATAGCAGAGAGAGCAGGACCAGGTGTGTTCTTGACAGTGTCTGAGATTGCTTCTGAGCTTCCGACACAGCACTCTGAGTTGCACAACAGGCTTGACCGAATGCTGCGTGTGCTCGCCACTTTCAAGGTTCTGGATTGCACCACTCGCACCAACCAAGATGGCGAGGTTGAGAGGCTCTATAGGGTGTCTCTCGCTGGGAGCTACTTTCTGCAGAATGGAACTGAGAGCCTCGCTTCATTCTCATATAACCTCAACTGCCATCCTGCTACTGCTAAGGTTGAACATGAAGGAAGCAATTCTGGATGGAGGAGTAGACCTATTCAACAAAGTACATGGGATAACCGTGTGGAAATACATGGAGAAGGACTCAGAACTAAGTCACACACTCTACAAGGCAATGGCAGGCATATCAGCCGTACAGATGAGCAAGTACTTAGAGGAATTGAGCATGTTGGAGGAGATATGTATGAAAGTGTTCCAAAGGGTGATGCTATTATAATAAAGTCTAAAAAAGCTAAAACTGGTGTGCGCAAATTGGAGTTTCATCTAGCTAAATCTAGCTCTCAGGTGGACGTGGATGCTAAATTGCTAATTGAATTTGATCTTCTTTTCATTCATGGTTTTAACCATAGTGTCATCAGGGAAAACTAG 807 0.4597 MSSTENSEQNLEVKPATKEEDDQACLYAMLLSSFQVFPAILNAAIELKVLDIIAERAGPGVFLTVSEIASELPTQHSELHNRLDRMLRVLATFKVLDCTTRTNQDGEVERLYRVSLAGSYFLQNGTESLASFSYNLNCHPATAKVEHEGSNSGWRSRPIQQSTWDNRVEIHGEGLRTKSHTLQGNGRHISRTDEQVLRGIEHVGGDMYESVPKGDAIIIKSKKAKTGVRKLEFHLAKSSSQVDVDAKLLIEFDLLFIHGFNHSVIREN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1129 268 PANTHER O-METHYLTRANSFERASE 28 141 IPR016461 GO:0008168
Dere06g1129 268 FunFam Caffeic acid 3-O-methyltransferase 4 121 - -
Dere06g1129 268 Gene3D Vaccinia Virus protein VP39 197 220 IPR029063 -
Dere06g1129 268 Gene3D - 3 121 IPR036388 -
Dere06g1129 268 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Dere06g1129 268 SUPERFAMILY "Winged helix" DNA-binding domain 19 125 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1129 Dere-ChrDere06 21312768 21316580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1129 20 220 Monolignol Biosynthesis Gene Families AT1G33030 30.502 2.00e-19 83.6