Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1128 ATGAGCACCACCACAGAAAATCAAGAATATGATGCATGCTTTGATGCTTTGTTGCTATCAGGTGGTCTGGTTTACCCCGCAGTGTTAAATGCTGCTATTGAGCTAGACCTGTTTGAGATCATTGCTAAGGGAAGCCCTAAAGGCATGTCACCCTTTGACATTGCATCCAAGCTTCCAAATACAAACGATGATATGGCTCGCCGGCTCGATCGACTGCTGTTTTTGCTTGCTAGTTACTCTCTGCTCACTTGTTCTTCTAAGAAAGTCTATGAAGATGGTAAGGTTGAGAGGCTTTATTGTCTTTCTCCCACTGGTAAATACTTTGTCACTGATGACGATGGAGCCTCCTATGCTTCAACCTTAAAAATGAGCTGTCACCCAGCCTTCATGAAAATTTGGCAAAACTTCAAGCAAGTGATTATTGGAGGTGAAGAGGACCTGTTTGAGAAAGTTCATGGGATTTCTATGTTTGAATATATGAAAACAGACTCAACATTGATGCCCTTGTTCCATAAGGTAATGGCTGATGTCACAACCATGCAGATGAGAAAGATTCTTGAGACCTACAAAGGGTTTGAGGGAATATCAACACTTGTCGATGTGGCTGGAGGCATTGGGCAAAGCCTTAAGATGATTATCTCTAAGTACCGTTCAATAAGGGGTATTAACTTTGATTTGCCCCATGTAGTAAAACATGCCCCATCCTACCCAGGAGTTAAGCATGTTGGAGGAGATATGTTCAGTAGTGTGCCAGAAGGTGATGCTATAATGATTAAGGCTACAATCCATAATTGGACAGATGAAAATTGCATAGAAATTTTGAAGAACTGTCACAGGTCGCTCAAAAAATATGGGAAGGTGATTATTGTTGACCTGATAATGCCTGAAATTCCAAAGGCAACCGATGGCCATAAGTTTGCTGCGATTTCTGACAACTCCATGTTTCTCCAACGTGGGAAGGAACGAACAGAGAAAGAGTTTGAAGCCTTATGCAAAGGTGCTGGGTTTTCTTCATATCAAGTAGCTTGTCGTGTTTTCGCGTCAACTTTGGGAGTCATTGAATTTTATAAATGA 1074 0.4153 MSTTTENQEYDACFDALLLSGGLVYPAVLNAAIELDLFEIIAKGSPKGMSPFDIASKLPNTNDDMARRLDRLLFLLASYSLLTCSSKKVYEDGKVERLYCLSPTGKYFVTDDDGASYASTLKMSCHPAFMKIWQNFKQVIIGGEEDLFEKVHGISMFEYMKTDSTLMPLFHKVMADVTTMQMRKILETYKGFEGISTLVDVAGGIGQSLKMIISKYRSIRGINFDLPHVVKHAPSYPGVKHVGGDMFSSVPEGDAIMIKATIHNWTDENCIEILKNCHRSLKKYGKVIIVDLIMPEIPKATDGHKFAAISDNSMFLQRGKERTEKEFEALCKGAGFSSYQVACRVFASTLGVIEFYK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1128 357 PANTHER O-METHYLTRANSFERASE 20 346 IPR016461 GO:0008168
Dere06g1128 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Dere06g1128 357 Gene3D Vaccinia Virus protein VP39 167 345 IPR029063 -
Dere06g1128 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 357 IPR016461 GO:0008168
Dere06g1128 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 343 IPR029063 -
Dere06g1128 357 CDD AdoMet_MTases 197 294 - -
Dere06g1128 357 SUPERFAMILY "Winged helix" DNA-binding domain 8 113 IPR036390 -
Dere06g1128 357 Pfam Dimerisation domain 28 77 IPR012967 GO:0046983
Dere06g1128 357 Pfam O-methyltransferase domain 133 337 IPR001077 GO:0008171
Dere06g1128 357 FunFam Caffeic acid 3-O-methyltransferase 1 108 - -
Dere06g1128 357 Gene3D - 24 185 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1128 Dere-ChrDere06 21214406 21216543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1128 1 357 Monolignol Biosynthesis Gene Families AT5G54160 48.501 2.00e-112 330