Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1127 ATGAAGCCCCCCACTAAGGAAGAAGACGACCAGGCATGCCTCTATGCCATGCTCTTATCAAGCTTCCAAGTATTCCCTACGATTCTGAACGCAGCCATAGAACTGAAGGTGTTGGACATAATAGCAGAGAGAGCAGGACCAGGTGTGTTCTTGACAGTGTCTGAGATTGCTTCTGAGCTTCCCACACAGCACTCTGAGTTGCACAACAGGCTTGATCGAATGCTGCGTGTGCTTGCCACTTTCAAGGTTCTGGATTGGACCACTCGCACAAACGAAGATGGCGAGGCTGAGAGGCTCTATAGGCTCTCTCTCGCTGGGAGTTACTTTCTGCAGAATGAAAGTGAGAGCCTTGCTTCCTTCTCAAACCTCACCTGCCATCAAGCTACTGTTCAGGTTTGGTTGAACATCAAGGATGCAATTCTGGGTGGAGGAATAGACCTATTCAATAAAGTACATGGGATAACCATGTGGAAATACATGGAGAAGGACACAAAACTGAACCATACATTCAACAAGGCAATGGCAGGAATCTCAGCAATACAGATGAGGAAGTATCTAGAAGTGTATGATGGATTCGAAGGAGTTTCAACCTTAGTTGATGTGGGAGGAGGCACTGGCCAAAGTCTCAAAATGATCATCTCCAAGCACCCTCATATCAAGGGTATAAACTTTGATTTGCCCCAAGTGATTCAACATGCCCCTCCCATTCCAGGAATTAAGCATGTTGGAGGAGATATGTATGAAAGTGTTCCAAAGGGTGATGCTATTATGGTAAAGGCCACATGTCATAATTGGTCAGATGAAAAATGTGTAACACTTTTAAAGAACTGTTACAAAGCACTTCCACTGAATGGGAAGGTGATTATTTTAGACATGATAATGCCTGAAGAACCAGAGTCAAGCGATGCGGCTAAGTATGTCTCCATTATAGACAACACAATGTTTATACAAGCTGGAGGGAAAGAAAGAACTAAGAAAGAATTCGAGAAGCTCTGCAAAGACTCTGGATTCTCAAGCTTTAGTGTTGTTTCCCGTGCTCTTTCGGTTTATGGTGTCATGGAGTTTTATAAATAA 1074 0.4376 MKPPTKEEDDQACLYAMLLSSFQVFPTILNAAIELKVLDIIAERAGPGVFLTVSEIASELPTQHSELHNRLDRMLRVLATFKVLDWTTRTNEDGEAERLYRLSLAGSYFLQNESESLASFSNLTCHQATVQVWLNIKDAILGGGIDLFNKVHGITMWKYMEKDTKLNHTFNKAMAGISAIQMRKYLEVYDGFEGVSTLVDVGGGTGQSLKMIISKHPHIKGINFDLPQVIQHAPPIPGIKHVGGDMYESVPKGDAIMVKATCHNWSDEKCVTLLKNCYKALPLNGKVIILDMIMPEEPESSDAAKYVSIIDNTMFIQAGGKERTKKEFEKLCKDSGFSSFSVVSRALSVYGVMEFYK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1127 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 355 IPR029063 -
Dere06g1127 357 PANTHER O-METHYLTRANSFERASE 17 355 IPR016461 GO:0008168
Dere06g1127 357 FunFam Caffeic acid 3-O-methyltransferase 1 109 - -
Dere06g1127 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Dere06g1127 357 FunFam Caffeic acid O-methyltransferase 111 357 - -
Dere06g1127 357 Gene3D Vaccinia Virus protein VP39 110 357 IPR029063 -
Dere06g1127 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 357 IPR016461 GO:0008168
Dere06g1127 357 Pfam O-methyltransferase domain 133 338 IPR001077 GO:0008171
Dere06g1127 357 SUPERFAMILY "Winged helix" DNA-binding domain 7 113 IPR036390 -
Dere06g1127 357 Gene3D - 1 109 IPR036388 -
Dere06g1127 357 Pfam Dimerisation domain 28 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1127 Dere-ChrDere06 21153418 21156295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1127 4 349 Monolignol Biosynthesis Gene Families AT5G54160 48.276 2.39e-111 327