Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1108 ATGGAATACGCTGGATTGACTAGTCTGCAATTGTTGATAATTCCAAGTTTTGAAAGCTCAGCGTGGTCTATCATGTCAATTTCATTCATGTCCTTACTAGCCATGTCTACAGTACTGGCTACTTGTTTCTTTGTACGCAGGCGTCATGTAAGAGGAGAAAGGCCTCGAGCTTCTAGTGTCTGTGAGTTTCATGGAATGAGTAGTCATCTGGTGAAAGCAATGCCAAGTGTAATATTTACTACTGTTTCAGAGGATAATTGTACGTCAAGAGCATGTGCAATATGCCTTGAAGATTATAGCATAGGAGAAAAGCTCAGAATTCTGCCCTGCCATCACAAACAGAAAAAGGAGAGGGAGAGGGAGAGGGGCTGCAAACCTGGTAACACCATTGAGAAGTATTGCATGGCATCTGCCACTGTTAATGGCGCATATTGTGTGTCCCAATGTGTACTGTATGGATTCTGGAATGCCACAGCCATGGAGGCACAAGCAATCATGGTGCAGCACTCTTCTAACAACTTGTTTCATGCCACCTGTGTGGATACTTGGCTTACTACATGGAGAACCTTTTGTCCAGTTTGTAAGCGTGATGCAAAAACTCGTGTACTTGATCCACCTCCACCTTCAGAATCCACACCTTTGCTTTCTGTGGCATCCTCTATATTATCGTCTGTGAGATCATCACTAGCATCATCTTCAAGTATACGAAATGTCCATGCAACATCGTGGTCCCTGTTTGTTTCTCGTAACCACTCTCTAGCTAGTACCCCTCCTGTTCAGCCTTCTCTTATACCGTACTACCAATCCTCCCCCCTAACCATCAGCCGAAGCTCAGTGGATCTTAGGAATGCATCCCAAAGATCTCTAACTCCTCATTCCAGAGATTGCCAATCTTTGTTATCTCTGAACTCAACTACACATATACCAAGTCTAACACATGCTTCTGCTAGATTTATTGGCTCATTCAGTAATTGGCAGCGGCACCCACTTCATCACAGTGAATGTACTGCAATGTTTCCTCCATTTGCTTCTGGTCAGTCCCTTCCGGAATGTGAAACTGTTTAG 1065 0.4404 MEYAGLTSLQLLIIPSFESSAWSIMSISFMSLLAMSTVLATCFFVRRRHVRGERPRASSVCEFHGMSSHLVKAMPSVIFTTVSEDNCTSRACAICLEDYSIGEKLRILPCHHKQKKERERERGCKPGNTIEKYCMASATVNGAYCVSQCVLYGFWNATAMEAQAIMVQHSSNNLFHATCVDTWLTTWRTFCPVCKRDAKTRVLDPPPPSESTPLLSVASSILSSVRSSLASSSSIRNVHATSWSLFVSRNHSLASTPPVQPSLIPYYQSSPLTISRSSVDLRNASQRSLTPHSRDCQSLLSLNSTTHIPSLTHASARFIGSFSNWQRHPLHHSECTAMFPPFASGQSLPECETV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1108 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 201 IPR013083 -
Dere06g1108 354 SUPERFAMILY RING/U-box 81 112 - -
Dere06g1108 354 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 17 112 - -
Dere06g1108 354 SUPERFAMILY RING/U-box 173 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1108 Dere-ChrDere06 20584150 20586883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1108 175 350 C3H Transcription Factor Family AT1G22670 36.066 2.74e-15 74.7