Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1092 ATGCAAAGGACTATTGATGGTATTCTTATTGAATATGTTAGTCATGGATCTGTTTACCAATTTGAGGTGAAGAAAGTTCTCAGTTCTGATTCCAAGAAAGATCAGCCCACAGATTTGGAACCGGCTTCGTCATTCAAAGTAGAACCATTAGCTGTTGCTCCTCCTCTTCCATCGATTGACACCAACGAAGAGAATGAAAAGAGCAAGCATGAACGAGCTTTGTCATTAAAAGAAGTACCATTTGATACTGCTCCTTCTCTTTCATCTATTGACACCGACGAAGAGAATGAAAAGAACAAGGATGCTTATTCTGTGGCTCTTGCCACTGATATTGCAGCAGAGGATGTTGTTCCTACTGCACAGGCCGCTGCAGAGGATGATAATCTCACAAGTGTGCCTTATTACCCAGAAAAGACAAAGGAAGAAATAGCAGCAACGAAAATTCAGATGGCATTTCGAGGATATTTGGCAAGAAGGGCATTGCATGAATTGAGACGGTTGGTGAGGTTGAAATCATTGATACAAGGGCACTCTGTCAAACGGCAAGCTGCAACCACCTTACGATCCATGCAGACTCTTGCACGGGTGCAATCTCAGACTCGTAAGAGAAGAATTAGAATGTCTGAGGAGAACCAGGCTCTTCAGTGGCAACTCAAGCAGAAACATGAAAATGAACATAATAATCTGCAAGCTGCTCAAACATGGAAGAATCCTTCAAAATCAGTAAATACCAAGTCAAAGCTTAACAATCCCTTCTGGGATTGGAGTTGGCTGGAGCGATGGATGTCATCTCAGCCATGGAAGAGCCAAAGCACTATGGATCACAATGACCTTGCATCTGTAAAATGTGCTCCAAACTCTACCATGTCAGTTGGAGAAATCATCAAATTGTATTCTCTTCGTGATCTAAATCATGGCAACAAACCTTCTGCTTCTGGCCAAAAATCAAGCCGACCTCCTGCCCACCCTTCCCCCTTAACCCCAGCTCCAAAGGTCCGATCTTCGCCATCTGCTAGTGAAAAACCAAGGCCACCAAGCTGGAAGGGAAACGCCAATGGCAGTGATGATGACTTAAGGAGCAAGATTACCAGTAGGTCACAGCACAACCGGAGACATAGCATTGCAGGATCTTCAGTAAGAGATGATGAGATCCACGTGAGCTCAAAGTCACCCAAGGTCAAGTCCAGAACACAAAGGCCACCTTCTCCAGTTGGAAATGTATCTGCTATCTCTGTAAAGAAGCAGCTTTCCTTCCCATCTTCGGCATCTCTAGCTGGTTCAAAGCGACATTCTTGTCCTCCTGAGGTGGAAATTTTTTCCAAAAAGGATATTGCTGCAATCACCGGAGAGGAAAAATAA 1359 0.4408 MQRTIDGILIEYVSHGSVYQFEVKKVLSSDSKKDQPTDLEPASSFKVEPLAVAPPLPSIDTNEENEKSKHERALSLKEVPFDTAPSLSSIDTDEENEKNKDAYSVALATDIAAEDVVPTAQAAAEDDNLTSVPYYPEKTKEEIAATKIQMAFRGYLARRALHELRRLVRLKSLIQGHSVKRQAATTLRSMQTLARVQSQTRKRRIRMSEENQALQWQLKQKHENEHNNLQAAQTWKNPSKSVNTKSKLNNPFWDWSWLERWMSSQPWKSQSTMDHNDLASVKCAPNSTMSVGEIIKLYSLRDLNHGNKPSASGQKSSRPPAHPSPLTPAPKVRSSPSASEKPRPPSWKGNANGSDDDLRSKITSRSQHNRRHSIAGSSVRDDEIHVSSKSPKVKSRTQRPPSPVGNVSAISVKKQLSFPSSASLAGSKRHSCPPEVEIFSKKDIAAITGEEK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1092 452 MobiDBLite consensus disorder prediction 29 76 - -
Dere06g1092 452 PANTHER IQ-DOMAIN 5-RELATED 67 433 - -
Dere06g1092 452 MobiDBLite consensus disorder prediction 305 410 - -
Dere06g1092 452 MobiDBLite consensus disorder prediction 391 410 - -
Dere06g1092 452 MobiDBLite consensus disorder prediction 305 320 - -
Dere06g1092 452 SMART iq_5 140 162 IPR000048 GO:0005515
Dere06g1092 452 Gene3D iswi atpase 138 178 - -
Dere06g1092 452 MobiDBLite consensus disorder prediction 374 390 - -
Dere06g1092 452 MobiDBLite consensus disorder prediction 62 76 - -
Dere06g1092 452 Pfam IQ calmodulin-binding motif 144 161 IPR000048 GO:0005515
Dere06g1092 452 ProSiteProfiles IQ motif profile. 141 169 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1092 Dere-ChrDere06 20345695 20349653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1092 97 437 IQD Protein Family AT5G03040 38.710 1.03e-58 197