Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1078 ATGGGTTTTTATCCTCAGCTCTATCTCTTTTTACTTTTATCCATATTTGTGGGAGTTTGTTTGGCTTCCCCTAGTGGAGATCAAAAGCGAGACAGAATCAGTGAGTTGCCAGGACAACCAAAGAGTGTGGATTTTACTCAGTACTCGGGCTACGTGACAGTGAATAAAGAGTCAGGGAGGGCATTGTTTTACTGGTTGACTGAAGCACCAGCGAGTCGTCAGCCTAAGTCAAGGCCATTGGTGTTATGGCTTAATGGTGGTCCTGGATGCTCCTCTATTGCTTATGGGGCATCCGAAGAAATAGGTCCTTTCCGCATTAGGCCTGATGGGAAGTCTCTCTACTTAAATCCGTATGCTTGGAATAAATTGGCAAACATACTGTTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCATATACGAATAAAACATCAGATCTGTATACAATGGGAGACCGGAGAACAGCTCAAGATGCATATACATTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAACATAGACAATTCTACATTGCTGGAGAAAGTTATGCAGGACATTTTGTTCCTCAGTTGGCTCAGATTATTCACCGTAGAAACAAGGGAATCAAGGATCCGGTTATAAATTTTAAGGGATTTATGGTTGGAAATGCTGTCACTGATGATTACCATGATTATGTTGGTACATTTGAGTACTGGTGGACGCATGGTTTAATTTCAGATTCCACATATAGGATGCTGCGAATTGCCTGTAAATCTGGGTCCTCCCAGCATCCAACATTACAATGCATGCAGGCTCTCAGAGTTGCAGCTGTGGAGCAGGGGAACATTGATCCATATAGCATTTATACACGGCCATGCAATAATACAGCATCCCTGAGACATGGCTTGAGGGGTCGCTATCCATGGATGTCGCGAGCATATGATCCCTGCACGGAGAGGTATGCTGATTTATACTTCAATCGTCCTGAAGTTCAGAAGGCACTGCATGCCAATACAACTGGTATTCGTTATTCATGGAAGTCATGCAGTGACATTGTTGGGAACTACTGGGCAGATTCTCCACTATCTATGCTTCCTATATATCAAGAACTCATTAATGCTCATCTGAGGATATGGGTATACAGTGGAGACACAGATGCTGTGGTTCCAGTAACCGCAACTAGATATTCTATTGATGCCTTGAAGCTACCTACCATCGTCAACTGGTACCCTTGGAATGATAATGGCAAGGTTGGGGGGTGGAGCCAAGTCTATAAAGGCCTCACATTGGTTACAGTTACAGGAGCAGGACATGAGGTTCCACTTCACAGGCCTCGCCAAGCATTTATTCTTTTCAGGTCATTCTTGGAGAACGAGTCCATGCCTAGTTGA 1374 0.4352 MGFYPQLYLFLLLSIFVGVCLASPSGDQKRDRISELPGQPKSVDFTQYSGYVTVNKESGRALFYWLTEAPASRQPKSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGKSLYLNPYAWNKLANILFLDSPAGVGFSYTNKTSDLYTMGDRRTAQDAYTFLVNWFERFPQYKHRQFYIAGESYAGHFVPQLAQIIHRRNKGIKDPVINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLISDSTYRMLRIACKSGSSQHPTLQCMQALRVAAVEQGNIDPYSIYTRPCNNTASLRHGLRGRYPWMSRAYDPCTERYADLYFNRPEVQKALHANTTGIRYSWKSCSDIVGNYWADSPLSMLPIYQELINAHLRIWVYSGDTDAVVPVTATRYSIDALKLPTIVNWYPWNDNGKVGGWSQVYKGLTLVTVTGAGHEVPLHRPRQAFILFRSFLENESMPS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1078 457 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Dere06g1078 457 SUPERFAMILY alpha/beta-Hydrolases 28 455 IPR029058 -
Dere06g1078 457 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Dere06g1078 457 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Dere06g1078 457 FunFam Carboxypeptidase 27 289 - -
Dere06g1078 457 Gene3D - 311 347 - -
Dere06g1078 457 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Dere06g1078 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 439 IPR001563 GO:0004185|GO:0006508
Dere06g1078 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Dere06g1078 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Dere06g1078 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Dere06g1078 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Dere06g1078 457 Gene3D - 358 451 - -
Dere06g1078 457 FunFam Carboxypeptidase 358 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1078 Dere-ChrDere06 20107404 20112627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1078 316 455 Calmodulin-binding Proteins AT2G22960 28.369 1.54e-12 64.3