Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1051 ATGTCTGTGTCTAAGAGGAGCTCAAAGAAGTTGTGGGCGGCTCTATGGTTACCCATGGTTTTTTTGAGCTTGAACTTCCGTGTGATCGACGGCCAACAAGTGAATGACTACGACCAAATCGATAACCCAGCTGTTCTTCCCCTCGTTACTCAGCTTGTATATAGTCAGATTTCCAATTTGACGTCAGTTCTGAGTCAGGATATCAGCAGCCACTCCAGTTTCTGCGTCAAGGATCCGGAAGCTGACTGGAACCAAGCCTTTAATTTTTCATCTGACTTGGACTTCTTGGCCTCGTGCATTCAAAAGACTAAAGGAGATATTACACGCCGTTTGTGTACAGCAGCAGAAATCAAATTTTACTTGACTACTTTCTTTGATAGATCTACAAGTGCTAATTATTTAAAGCCAAACAAGAACTGCAATTTAACCTCATGGGTTTCTGGTTGTGAGCCTGGATGGGCTTGTAGTGTTGGCCAAACCCAGCAGGTTGACCTTAAAAATTCCAAGGAGATGCCTGTAAGAACTACAAACTGTCAACCCTGTTGTGAGGGCTTCTTCTGTCCTCATGGTATCACATGCATGATACCTTGCCCATTAGGTTCGTATTGCCCTCTTGCAACACTAAATAATGCAACTGGTGTCTGTGAACCATATTTTTACCAGCTGCCTCCAATGCAGCCAAATCATGCATGTGGAGGAGCAAATATATGGGCTGATGTTAGTAGCAGCAGTGAAATATTTTGTTCAGCTGGATCGTTTTGCCCAACAACTACCAAAAGAATCCCTTGCAGTCGTGGACATTACTGCAGAATGGGTTCTACATCTGAGAAGAGATGCTTCAAGTTAAGTTCATGTAATTCAAACACAGCAACACAAAGTATGCATGCATATGGAGTTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTGTTTACAATTGTTCTGACCAAGTTCTCACTACTAGGGAAAGGAGAATGGCCAAATCCAGAGAAGCAGCAGCTAGAAATGCAAGGAAGACTGCCAATGCACGCCAAAGATGGAAAGCTGCAAAGAATGCTGCCAAGAAGCATGCCAGTGGGCTGCAAGCTCAGTTATCACAGACATTTTCTCGTAAGAAGGATGTAGGAAATCCTGAAAGAATTAAAATTTTGAATGAAGTAACTTCTGAAACAGATGTTGAATTGTTATCCCCACCTTCTATTGCTTCAAGCATGGCTGTAACTTCATCTGCAATGCCAAAGGAAAAGGGAAAGGAACCCAGTGACTTGATGCAGGTGATGTATGAAATTGAAAATGATCCAGACATAAATGACAGCTTTTATGTAGAAGCTGCACATGATAAAAGTGTCAAAGGAAATTTGCGCAAGGGAAAGCAACTAAATACACATAGCCAAATATTTGGGTATGCATATGCTCAACTTGAAAAAGAGAAGGCTCAGCAAGAAGAAAACAAGGACCTTACCTTCTCAATAGTAATTAAAATGGCTACTAACAGTGAACAAAGAAGAAGGCCTTTAATTGAGATTTCTTTTAAAGATCTGACTCTTACATTGAAAGCACAGAACAAGCATATATTGCGATGTGTTACAGGGAAAATTAAACCTGGACGTATTACTGCACTCATGGGTCCATCAGGAGCAGGCAAGACAACATTTCTTTCAGCTCTAGCTGGAAAGGTATATGGATGCACTATGGCGGGCTCAATACTTGTAAATGGAAAGAATGAATCAATTCACTGCTATAAGAGAATTATCGGTTTTGTGCCACAAGATGATATAGTTCATGGAAACCTGACAGTGGAAGAGAACCTCTGGTTCAGTGCCAAGTGTAGGCTATCAGCTGACTTGTCAAAACCAGACAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAGTCAGTGCGGAATTCCTTGGTTGGAACAGTAGAAAAGCGAGGGATCTCTGGAGGCCAAAGAAAGCGTGTAAATGTTGGATTAGAGATGGTCATGGAACCTTCACTTTTAATTTTAGATGAACCAACCTCTGGTCTGGACAGTGCGTCATCTCAGCTCCTTCTCAGAGCACTAAGACGTGAAGCTCTTGAGGGGGTGAACATTTGCATGGTTGTTCACCAACCTAGTTATGCCCTATTCAAGATGTTTGATGACTTGGTACTTCTGGCAAAAGGTGGTCTTACTGTCTATCATGGCTCGGTAAAGAAAGTTGAAGAATACTTTTCTGGCCTTGGGATAAAAATCCCAGAGAAGATCAATCCTCCTGACTACTTCATTGACATTTTGGAGGGTATAATAGCAGTACCTAGTGGAAGCTCGGTGGTGAGCTGTAATGAGCTGCCAGTTAGATGGATGCTTCACAATGGATACCCTGTACCTCTTGAAATGAGGCAGATTGCAGGAAAAATTGATGTGTCCTCTCCAGTTGTAAATCTAGTTAATGAAATAGATCCTGATGGTTCTGGTTATGAGGAAAAATCCTTTGCTGGAGAATTATGGCAAGATGTGAAACACAACGCAGTGCTGCAGGGGGATAAGATAAGGCTCAATTTCTTAAAGTCCAAGGATTTATCTAACCGAAAAACTCCTGGTCTTTTCAAGCAATATAAGTACTTCCTTGCAAGGGTTGGTAAACAGCGATTGCGGGAAGCTAGAATCCAAGCAATAGATTATCTGATTTTATTACTTGCTGGAGCCTGCTTAGGAACACTTACTAAATCAAGTGATCACACGTTTGGTGCAGCTGGGTACACCTATACAGTTATTGCTGTCTCTCTTCTATGCAAAATAGCAGCCTTGAGATCATTTTCTCTGGATAAGTTACACTACTGGAGGGAAAGTGATTCTGGCATGAGTAGCTTGGCTTATTTTCTCTCTAAAGACACAATTGATCATTTCAACACAGTCATCAAGCCTGTGGTGTACCTGTCCATGTTCTATTTCTTCACCAACCCGAGATCTACTTTTGCAGACAATTACATAGTGCTGCTATGTCTTGTATACTGTGTCACTGGCATAGCGTATGCATTGGCAATATTATTTGAACCAGGTGCAGCCCAGCTGTGGTCAGTACTTCTCCCAGTTGTTTTGACACTTATTGCAACACAACCGAAAGATAGTAAATTTTTGAAGGATATAGCTAATTTATGCTATTCTAAGTGGGCTTTACAGGCATTTGTAATTGCTAATGCTGAAAGGTATCACGGAGTGTGGCTCATAACTCGCTGTGGTTCACTTCTCAAAAGTGGCTATAATCTCCATGACTGGAGTTTGTGCATATTAATTCTCGTTCTTATCGGTGTAGCTAGTCGGGCAATTGCTTTTTTATGTATGATCACCTTCCAAAAGAGGTAA 3360 0.4143 MSVSKRSSKKLWAALWLPMVFLSLNFRVIDGQQVNDYDQIDNPAVLPLVTQLVYSQISNLTSVLSQDISSHSSFCVKDPEADWNQAFNFSSDLDFLASCIQKTKGDITRRLCTAAEIKFYLTTFFDRSTSANYLKPNKNCNLTSWVSGCEPGWACSVGQTQQVDLKNSKEMPVRTTNCQPCCEGFFCPHGITCMIPCPLGSYCPLATLNNATGVCEPYFYQLPPMQPNHACGGANIWADVSSSSEIFCSAGSFCPTTTKRIPCSRGHYCRMGSTSEKRCFKLSSCNSNTATQSMHAYGVMLIAALSTLLLIVYNCSDQVLTTRERRMAKSREAAARNARKTANARQRWKAAKNAAKKHASGLQAQLSQTFSRKKDVGNPERIKILNEVTSETDVELLSPPSIASSMAVTSSAMPKEKGKEPSDLMQVMYEIENDPDINDSFYVEAAHDKSVKGNLRKGKQLNTHSQIFGYAYAQLEKEKAQQEENKDLTFSIVIKMATNSEQRRRPLIEISFKDLTLTLKAQNKHILRCVTGKIKPGRITALMGPSGAGKTTFLSALAGKVYGCTMAGSILVNGKNESIHCYKRIIGFVPQDDIVHGNLTVEENLWFSAKCRLSADLSKPDKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLVLLAKGGLTVYHGSVKKVEEYFSGLGIKIPEKINPPDYFIDILEGIIAVPSGSSVVSCNELPVRWMLHNGYPVPLEMRQIAGKIDVSSPVVNLVNEIDPDGSGYEEKSFAGELWQDVKHNAVLQGDKIRLNFLKSKDLSNRKTPGLFKQYKYFLARVGKQRLREARIQAIDYLILLLAGACLGTLTKSSDHTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYALAILFEPGAAQLWSVLLPVVLTLIATQPKDSKFLKDIANLCYSKWALQAFVIANAERYHGVWLITRCGSLLKSGYNLHDWSLCILILVLIGVASRAIAFLCMITFQKR 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1051 1119 Gene3D - 496 747 IPR027417 -
Dere06g1051 1119 Pfam ABC transporter 529 679 IPR003439 GO:0005524
Dere06g1051 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 510 743 IPR027417 -
Dere06g1051 1119 ProSitePatterns ABC transporters family signature. 651 665 IPR017871 GO:0005524|GO:0016887
Dere06g1051 1119 FunFam ABC transporter G family member 24 504 746 - -
Dere06g1051 1119 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 510 752 IPR003439 GO:0005524
Dere06g1051 1119 SMART AAA_5 536 728 IPR003593 GO:0016887
Dere06g1051 1119 Pfam ABC-2 type transporter 708 1118 IPR043926 GO:0140359
Dere06g1051 1119 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 252 1108 - -
Dere06g1051 1119 CDD ABCG_EPDR 508 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1051 Dere-ChrDere06 19628491 19638748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1051 534 730 Calmodulin-binding Proteins AT2G36910 28.218 4.08e-11 65.9