Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1040 ATGATGAAGAATTCAGTTTCAGATCAGAGTTTTTATGTTGAGAGCGATGGCGAAGATGAGGAAAAGCGAGGCAATATAGTTGTAGATGACGGGAACGAATCGGACAGCTCCAACGGCTCTGACGAAAATCAGCCACAGCGTAAACCCAGTGTGTACGGCCTTGCTTGGCCTCAGAGTTACAGGCAGTCGATGGATCTATATGGTAGTGTACCATCACCAAATATTGGATTTCTGGGCCCTCCCGGGTTGTCAACATTAGGCAGCTCTTTTCTTTCTTCAACATTAACACTAACTAGAAGGCACACTCCTGAAAGACTTCCTTCAGTTACGAAACCTTTGATACAACCACCAGCAGAAGAGCAACGTAAACCTAGCCTTCAGTTTTTGCTTCCTCCTGTTCCGTCGAGAGGGTCTTTGATTAGGAAGGATGATGCCAAAATTTCTCATGAAATTCCAATTTCTCCCCAATGTTCTTTTGGACAAGCTGTAATCAATGGACTCCTTTCTACCCCTTATGCTGTCAAACAAGGAGGATGGCTTGGGCTTCCTATCTTGTTCATGTTTGCAATTCTTTCATTTTATACCGGGCTGCTCTTGCGTCGCTGCTTGGATAGTGAACCTGATCTTGAAACATACCCTGACATTGGCCATGCTGCTTTTGGTCCTGTAGGACGCATTTTCATTTCGATAATATTGTACGTGGAATTATATGCTAGTTGCATTGAATATATCATTTTGGAGAGTGATAACTTGTCTTCATTATTTCCAAATGCACACATAACTTTGGGTGGATTGGAATTAGATTCACACGTTTTGTTTGCTTTGATGGTCACCTTGGCTGTTCTTCCTACTGTTTGGCTCCGTGACATGAGAATTCTTAGTTATATCTCAGGTAGGAGACCTATCTTTTACAGCTTGAGGGGAAGTGTTGCTTGTGGAGTTGTTGCAACAATTTTGGTGGTTCTCTGCTTGTTCTGGGTTGGTCTGGTAGATGAAGTTGGCTTCCAGAGCAAAGAAACAACACTTAATCTTGCAACTCTTCCTGTCGCTCTTGGTCTCTATGGTTACTGTTACTCAGGACATGCTGTGTTTCCAAACATCTATACATCAATGGCAAATCCGAACCAATTTCCTGCAATGCTCTTCACGAGTTTTGGTATTTGTACCATAATGTATGCTGGAGTAGCTATTTTGGGTTACAAAATGTTTGGAGATTCTTCACTCTCGCAATACACTCTTAACATGCCTCAAGATCTAGTGGCCACCAAGATTGCTGTGTGGACTACGTTTCGAAGTTCCTCAGTTGCATTTGTTAGACCAATTGCATATGACTTTGTTGCAGGTCTGGTGATGTCATTGATTGGATCTCTACTCACAATGTTTGTGGGTAAAGTCTCACGCTTTCAGGTCGCAATGTGTATCACTATTATCATCATAGGTCTTGTATCATGTATCTTTGGATCATACTCAGCCATGTCCAAGATCATTCAGAGTTTGAGTGGATGA 1506 0.423 MMKNSVSDQSFYVESDGEDEEKRGNIVVDDGNESDSSNGSDENQPQRKPSVYGLAWPQSYRQSMDLYGSVPSPNIGFLGPPGLSTLGSSFLSSTLTLTRRHTPERLPSVTKPLIQPPAEEQRKPSLQFLLPPVPSRGSLIRKDDAKISHEIPISPQCSFGQAVINGLLSTPYAVKQGGWLGLPILFMFAILSFYTGLLLRRCLDSEPDLETYPDIGHAAFGPVGRIFISIILYVELYASCIEYIILESDNLSSLFPNAHITLGGLELDSHVLFALMVTLAVLPTVWLRDMRILSYISGRRPIFYSLRGSVACGVVATILVVLCLFWVGLVDEVGFQSKETTLNLATLPVALGLYGYCYSGHAVFPNIYTSMANPNQFPAMLFTSFGICTIMYAGVAILGYKMFGDSSLSQYTLNMPQDLVATKIAVWTTFRSSSVAFVRPIAYDFVAGLVMSLIGSLLTMFVGKVSRFQVAMCITIIIIGLVSCIFGSYSAMSKIIQSLSG 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1040 501 PANTHER OS05G0424000 PROTEIN-RELATED 156 474 - -
Dere06g1040 501 MobiDBLite consensus disorder prediction 1 50 - -
Dere06g1040 501 MobiDBLite consensus disorder prediction 30 47 - -
Dere06g1040 501 Pfam Transmembrane amino acid transporter protein 165 425 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1040 Dere-ChrDere06 19381789 19402569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1040 2 429 Amino Acid or Auxin Permease AAAP Family AT2G39130 65.315 0.0 570