Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1011 ATGTTTTCAAGACTAATACATCCTCACGACGGAATGAGTGGACAAGAGAATATGCAAGGTGGGTTAAACCACAGTCCTTTGGGAGACCCATGCCTTGTGTTGACTGCTGATCCGAAACCTCGTCTTCGTTGGACCGCTGACCTTCATGAACGATTTGTTGATGCTGTCACTCAACTTGGAGGTGCTAGTAAGGCTACACCAAAGGCAATCATGAGGACCATGAATGTCAAGGGTTTGACTCTTTATCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGTAAGCAATCTGGAAAAGATAATGCCGAGGGATGCAAGGATGGAATATCTGCTTCATATCTTTTAGAAAGCCCTGGTGACTCTGCTCCAAAGTTGCCAACTCCTGATGCAAATGAGGGTCACGAAGTCAAGGAGGCTTTAAGAGCACAAATGGAAGTGCAAAGTAAACTGCATTTGCTGGTGGAGGCAGAGAAGCACTTGCAGACACGCCAGGATGCAGAGCGAAAATATATGGCCATGCTTGAGAGAGCTTGTAAGATGTTGGCTGATCAATTTATTGGTACCACAGTTACAGAAACAGACAGCCAAAAATTTCAAGGCATGGGAAGCAAGGCATCAAGAAGTTCTTTGCCTGATCCCCTTGGCTTTTGCTCCTTACCATCGACTGAGGCGGCTGGAGTGCATGTTTCTGAAGTACAGCCTAGTTTCCAGCCGCAAAGGGCTGATTGTTCCACTGAAAGTTGCCTGACATCGCTCGAGAGTCTTGGAGGGTTGACTCTAGAAGGATCTCCAGGTGGGGCTAAAAGGAGGATGCTGAGTTTGGACTCTATGGTGGCACCCTTGATCTGGAGTGAAGCCAATATGAGAACTCATGGCATTCATTTAGCCCAAGTCAATCCTCATGCAATAACTAGGTATGGCATGTAG 927 0.4617 MFSRLIHPHDGMSGQENMQGGLNHSPLGDPCLVLTADPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDNAEGCKDGISASYLLESPGDSAPKLPTPDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQTRQDAERKYMAMLERACKMLADQFIGTTVTETDSQKFQGMGSKASRSSLPDPLGFCSLPSTEAAGVHVSEVQPSFQPQRADCSTESCLTSLESLGGLTLEGSPGGAKRRMLSLDSMVAPLIWSEANMRTHGIHLAQVNPHAITRYGM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1011 308 Gene3D - 38 96 - -
Dere06g1011 308 FunFam Myb family transcription factor 38 96 - -
Dere06g1011 308 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Dere06g1011 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Dere06g1011 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Dere06g1011 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 254 IPR044848 GO:0003700
Dere06g1011 308 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Dere06g1011 308 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
Dere06g1011 308 Coils Coil 156 176 - -
Dere06g1011 308 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1011 Dere-ChrDere06 18940123 18945574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1011 20 252 G2-like Transcription Factor Family AT3G24120 47.012 3.35e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere06g1011 Myb_DNA-binding 1.3e-06 CL0123