Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere06g0999 | ATGCCACTTTCCAATCACAAGCCCAAGCCCATTATGATTGTTAATCAACTCATAAACCAGAGAAAGAAGTTTCCATCCATGAAGTCCTTGTTTGGCCACTTGAGGTCTCACCATAGAAGGGAACAGAAGGAAACTCAACCCCACACTACTCCGTCGTCTCTCGTTGATCACTTGCGATCTTTATCACCCTCATGGTCGTCTTTCACCGGAAAGAGAGGTCGCCCGGGCAAAAGCGTCACTGTTTTCGAACCCTATATAGATGAATACGCTTTTGACCTCATGATGCTCGTGTATGGAAATAGTAATGTCCATGAATTTTTCAACCCTAAGAGGCCAAGAAAGGTCAAAACTGCTAAACCTAATGGTGAAGATGATCATGATGATGTGAACGCAAAAGTGATAGGAAGTAGAATTGGCATTGGACATCAGTGTAATATTTGCCAGAAGACATTCTCAACAGGTCAAGCTCTTGGAGACCACATGAGATATCATTGGACGCCTTATGATGCAGAAGCAAAGTCTTCGAATGAAACCACTTCTGCTCCTCAGCCCCTTGGTGTGCATGATGCAGTCCACTCATCACCTCTATGA | 591 | 0.4416 | MPLSNHKPKPIMIVNQLINQRKKFPSMKSLFGHLRSHHRREQKETQPHTTPSSLVDHLRSLSPSWSSFTGKRGRPGKSVTVFEPYIDEYAFDLMMLVYGNSNVHEFFNPKRPRKVKTAKPNGEDDHDDVNAKVIGSRIGIGHQCNICQKTFSTGQALGDHMRYHWTPYDAEAKSSNETTSAPQPLGVHDAVHSSPL | 196 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere06g0999 | 196 | MobiDBLite | consensus disorder prediction | 35 | 56 | - | - | |
Dere06g0999 | 196 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 22 | 179 | IPR044653 | GO:0003700 | |
Dere06g0999 | 196 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 142 | 164 | IPR013087 | - | |
Dere06g0999 | 196 | MobiDBLite | consensus disorder prediction | 173 | 196 | - | - | |
Dere06g0999 | 196 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 144 | 164 | IPR013087 | - | |
Dere06g0999 | 196 | SMART | c2h2final6 | 142 | 164 | IPR013087 | - | |
Dere06g0999 | 196 | SUPERFAMILY | beta-beta-alpha zinc fingers | 142 | 166 | IPR036236 | - | |
Dere06g0999 | 196 | Gene3D | Classic Zinc Finger | 141 | 187 | - | - | |
Dere06g0999 | 196 | Pfam | C2H2-type zinc finger | 22 | 39 | - | - | |
Dere06g0999 | 196 | Pfam | C2H2-type zinc finger | 142 | 166 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere06g0999 | Dere-ChrDere06 | 18798527 | 18799345 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere06g0999 | 2 | 165 | C2H2 Transcription Factor Family | AT2G17180 | 27.638 | 7.49e-11 | 58.2 |