Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0992 ATGGGTCGTGATTCTGCTACTTCACTGGCTCCCGGGTTCCGATTTCACCCCACCGACGAAGAACTAGTTCGTTACTACCTCAGGCGCAAGATCTCCGGCAAATCCTTCCGGTTTGACCCAATCGCGGCCATCGACGTCTACAAATCCGAACCTTGGGACCTCCCTTGTCAGTCGAAGCTGAAAAGCAGGGACTTGGAGTGGTACTTCTTCAGTGCTCTGGACAAGAAGTACGGAAATGGGTCGAGGACGAATCGGGCCACTGTGAAAGGTTACTGGAAGACAACGGGAAAGGATCGCCCAGTACGCCACAGCTCTCGAATAGTGGGAATGAAGAAGACCCTCGTTTATCATAGTGGGCGGGCGCCGCGTGGTACCCGTACCAATTGGGTCATGCATGAATACAGATTGGCGGATGAAGAATTGGCGCAAGCAGGAATAGCACAGGATGCGTTTGTGCTCTGTAGAATTTTCCAGAAGAGTGGCTCAGGGCCAAAGAATGGGGAGCAGTATGGTGCCCCCTTTATAGAGGAGGAATGGGAAGACGATGATGTTGCGGTGGCTCCACTGCCAGGTGATGAGGCTGTGACTGATGAAGTGGTAGTTGGTGATGATGCTTTTGCTGAAACGGACGACCTTTACCAGTACCAGGATATGGGCGTGTCATCTGAATGTGCTGGTCTTCCATTTAACTTCTATCATGGGGAGTGTAGCCGCTATCCTGAGCGTCCCCAAGAATTTATTGAAGATCAAAAGCCCTTATTAGGCACCAGTGAAACTCTTGAGCCTCAAGATGACATGCTCTTGAATAAGCCTGAGGATTATACTGCAGACAGCAAACCAGTAAAAGATGGTATTAATGGTATAGCAAGTCATGATGAGAATCCTCTGAATTACAATTACGCTTTTGATGAGCTATACTTGGATGCCACTGATAATCTTCTTGTTGGTGATGGATCATTCCTGGAAACCAATGATCTTGTGAATCCTGTTGAGGCAAACCCTGCTGAGACAGATGCTGCTGATAATGATATATCAGAAGAGTATCTTATGTACTTTAATGCCGATGATGATATTTCCCAGTATATCTCTTTTGATTCTCCTGAGTTTACGGGGAATGAAATCCCTGTTCCTGACCAAGGACCACCTTTGACCCAGCAGAATGTGGGTGAAGAAACCAACGATATTCCCATGGCGAGTAAAAATGATATAGAAGCACATTCTAGCAAAGCTTCCTCTTTGGAGCAGCACCCTGAGGCATCAAAATTGGTATCAGGGAATACATTGCCATCTGTGAACCAGGCGGCCAGTCACTTGTTGGGAAGCATCCCAGCTCCCCCTGCATTTGCTTCAGAGTTTCCTCCTAAAGATATTGCTCTTCGGCTTCATTCTGCTGGTCAAAGTTCCAATTCAGCTCACGTAACTGCAGGTGTAATTAGAATAACAGATTTCACTGACAACAGGATGGATTGGATGCTGGGCAAGAATGGCGAGTTCAACATTATACTCTCGTCTTGCTTTACTCAGCCTGATGTCAACTCTGCTGCTTTAGGGCCTGTTTCTGGTTTGCTCTCTGGCAAGGCTGCATTTATGGTGTCACACGGCTGGATTTTCATAATCTTATTTTCAGTTCTGATTCTTTCACTGAGTTTGAAGATTGGAAGCGTTATGTATACTGGTAAATGA 1683 0.4664 MGRDSATSLAPGFRFHPTDEELVRYYLRRKISGKSFRFDPIAAIDVYKSEPWDLPCQSKLKSRDLEWYFFSALDKKYGNGSRTNRATVKGYWKTTGKDRPVRHSSRIVGMKKTLVYHSGRAPRGTRTNWVMHEYRLADEELAQAGIAQDAFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDDVAVAPLPGDEAVTDEVVVGDDAFAETDDLYQYQDMGVSSECAGLPFNFYHGECSRYPERPQEFIEDQKPLLGTSETLEPQDDMLLNKPEDYTADSKPVKDGINGIASHDENPLNYNYAFDELYLDATDNLLVGDGSFLETNDLVNPVEANPAETDAADNDISEEYLMYFNADDDISQYISFDSPEFTGNEIPVPDQGPPLTQQNVGEETNDIPMASKNDIEAHSSKASSLEQHPEASKLVSGNTLPSVNQAASHLLGSIPAPPAFASEFPPKDIALRLHSAGQSSNSAHVTAGVIRITDFTDNRMDWMLGKNGEFNIILSSCFTQPDVNSAALGPVSGLLSGKAAFMVSHGWIFIILFSVLILSLSLKIGSVMYTGK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0992 560 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Dere06g0992 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 218 - -
Dere06g0992 560 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Dere06g0992 560 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Dere06g0992 560 FunFam Nac domain-containing protein 86 18 162 - -
Dere06g0992 560 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0992 Dere-ChrDere06 18691914 18695230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0992 1 556 NAC Transcription Factor Family AT5G04410 43.919 4.03e-147 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere06g0992 NAM 1.6e-36 No_clan