Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0964 ATGTTGGTGATGGAGAAAGATTTTGATTCCAAGTTGAGGATTCAGGGTGATTCGTCTAATGGTGGGAATGTCCAGAGAACTCAAGGCTTTCCCTTCCGAGCTCCTCAGGAGAATTGCACCATCGAGGACTTCGAACTGGGCAAGATCTACGGCGTTGGTTCTTACTCTAAGGTTGTAAGGGCAAAGAAGAAGGACACGGGAAATGTGTATGCATTGAAGATCATGGACAAAAAATTTATCACGAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCTTAGTGCTTGATAAATTGGACCATCCTGGCATTGTGCGGCTTTTTTTCACATTTCAAGACACATTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTTGTCTGTCAGAGGATGAAGCACGGTTCTATGCAGCTGAGGTTGTGGATGCTCTTGAATACATACATAGTTTGGGCTTGATACATCGCGATATTAAGCCCGAGAACTTGTTGCTTACAGCTGAAGGACATATTAAGATAGCTGATTTTGGAAGTGTGAAGCCTATGCAGGGTAGCCAAATCATGGTCTTCCTTCCAAATGCAGCATCAGATGATAAAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCTCCGGAGGTTCTTAATTCTTCTCCAGCTTCTTTTGGAAATGACCTCTGGGCACTTGGATGCACATTATACCAAATGCTTTCTGGCACTTCTCCTTTTAAAGATGCGAGTGAATGGCTTATTTTCCAAAGAATCATAGCCAGAGATATTCGGTTTCCAGATTATTTTTCTGATGAAGCAAGAGATCTTATTGACCGGTTATTGGATTTGGATCCCAGCAGTAGACCAGGTGCTGGACCTGACGGTTATACTGTTTTGAAAAAGCATCCCTTTTTCAGGGGAGTGGACTGGAGTAACCTTAGGGATCAAATCCCTCCAAAACTTGCAATGGAACCAGGAGTGCAGTCACCTGAAGATGATGATGTTTATGATTCATCATGGAATCCTTCCCACATTGGTGACGGTTCGGCTACGCAACCTGATGGAAATACTGGTGCTACATCTTCTTCTGAAGGGATTGGTCACATAACTAGGCTAGCCTCAATTGATTCTTTTGATTCAAAATGGCAGCAATTTTTAGATCTTGGGGAATCTGTTATTATGATCTCAATGGTAAAAAAGATGCAGAAACTAACAAGCAAGAAGGTCCAGCTTATCCTTACTAACAAACCAAAGTTGATCTATGTGGACCCATCCAAGCTTATTGTGAAGGGAAATATAATTTGGTCTGATAATCAGAATGATCTAAGCATCCAAGTGACAAGCCCTTCACATTTCAAAATTTGCACACCAAAGAAGGTAATGTCATTTGAGGATGCTAAGCAAAGAGCGTATCAGTGGAAGAAAGCAATTGAAGGGCTACAAAACGGGAAATTGGGTTGTGGATTTAGCCTTACCAAAGCTGGTTCAGTGTATAAGTTTCAATTATATTCTGTGTTGGAGGTCGGAAACTTGGATTCACTACTTTAGCCCTGGTCAGATTGTGTAGCCATCTTTCAGGATATTTTTGCCCCTGTAGAGCTGCAGATAGTAATACGGGATTTGAATGTTAATAGCTGCTGTGTCTTCTGGATCGTTCTTCTGGAAGAGTCTCAAAGGAACCAGGATTGA 1710 0.4199 MLVMEKDFDSKLRIQGDSSNGGNVQRTQGFPFRAPQENCTIEDFELGKIYGVGSYSKVVRAKKKDTGNVYALKIMDKKFITKENKTAYVKLERLVLDKLDHPGIVRLFFTFQDTFSLYMALESCEGGELFDQITRKGCLSEDEARFYAAEVVDALEYIHSLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQGSQIMVFLPNAASDDKACTFVGTAAYVPPEVLNSSPASFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSDEARDLIDRLLDLDPSSRPGAGPDGYTVLKKHPFFRGVDWSNLRDQIPPKLAMEPGVQSPEDDDVYDSSWNPSHIGDGSATQPDGNTGATSSSEGIGHITRLASIDSFDSKWQQFLDLGESVIMISMVKKMQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNQNDLSIQVTSPSHFKICTPKKVMSFEDAKQRAYQWKKAIEGLQNGKLGCGFSLTKAGSVYKFQLYSVLEVGNLDSLLXPWSDCVAIFQDIFAPVELQIVIRDLNVNSCCVFWIVLLEESQRNQD 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0964 569 Gene3D - 369 491 IPR011993 -
Dere06g0964 569 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Dere06g0964 569 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Dere06g0964 569 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Dere06g0964 569 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
Dere06g0964 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Dere06g0964 569 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Dere06g0964 569 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0964 569 Pfam Protein kinase domain 46 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0964 569 SUPERFAMILY Protein kinase-like (PK-like) 41 356 IPR011009 -
Dere06g0964 569 SUPERFAMILY PH domain-like 306 491 - -
Dere06g0964 569 Pfam PH domain 387 489 IPR033931 -
Dere06g0964 569 MobiDBLite consensus disorder prediction 326 370 - -
Dere06g0964 569 MobiDBLite consensus disorder prediction 349 370 - -
Dere06g0964 569 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 344 - -
Dere06g0964 569 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0964 569 FunFam 3-phosphoinositide-dependent protein kinase 1 360 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0964 Dere-ChrDere06 18014900 18032191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0964 1 489 AGC Kinase Gene Family AT3G10540 80.691 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Dere06g0964 Pkinase 6.4e-66 CL0016