Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0962 ATGTTGCAAAAGATGTTTTGCAAGGTAACCTTCCTTTCCTCCCGTTCTCTCTCTTTTGCATCATACTCTTCGTCTCTCCAACACAGTTGCAGTTGGATACCCGTCGTCGTCGTCGTCTTCGTCTTCGTCGACGACGACGTTGTAGGACCCTTCACCTTCGCCGCCGGCATGGCCTCGCCGAGACCACACAGCTCTCGATCATCTTTCAGGGATGACGACTCTGACTCCGACTCCACCAAGCTCGAGGGGACTGGTAGTTGGGACGCTATAGAATGGACCAAGATTGAGCCCATTTTACCCTTTGTTTCACATGAGAATTTGGATTTCTTGCTCGAGGCAGAGCAAGTCAAAACCCAAGAACATGGCATTGTTCTTGTTAATAACAATGATGTTGGTACATTAATGGTAACAAATTTTCGTCTTCTATTTGTGAGTGAGAAAACTACAAAAGTTATTGCCCTAGGAACAATACCCCTTGCAATGATCGAGAAGTTTAGCAAGATAGCTGTAAAGGCTCAATCGGCTACTCGTCAATCTGAGAAAACACCACCACAAAGACTGCTCCAGGTCATTGGAAAGGATATGAGAATTATAGTTTTTGGTTTCAGGCCTCGTACAAAACAGAGACGTGTAATATATGATTCATTGCTGAGGTTAACAAAGCCGGCAAGTCTATGGGATCTCTATGCTTTTGTATCTGGGCCTTCTAGATTCAACAACACTAACCCAAAGGTGCGGTTACTAGATGAGTATTTTCGGCTTCTTGGAAGAGGATCTTATTGTGCATCAATCAATATGATTGGAAGTGGGTCCTTTACCTTGTCAAATGACTTGTGGAGAATAAGTAGTGTGAATTCCAACTATACAATGTGCCAGACTTATCCATTTGCTTTGATCATTCCAAAGAGCATTAGTGACGATGAAGTGCTTCAGGCTTCCACTTTTCGCGCTAGATGTCGCCTGCCTGTAGTTTCATGGTGTCATCCTGGTACTGGAGCAGTCCTTGCACGTTCATCCCAACCCTTAGTTGGTCTCATGATGAACATAAGGAGCAACACTGATGAAAAGATTGTGGCTGCACTTTGCAGCAAACTGGATGATGGCTCACGGAGGAAGCTATATATTGCTGATGCAAGACCAAGGAAAAATGCATTGGCTAATGGGGCTATGGGAGGTGGTTCAGAATCATCATCTAATTACTTTCAATCTGAGATAGTCTTTTTTGGGATAGACAACATCCATGCCATGAGAGACAGCTTTGCTCGACTTAGAGAATACTTGGATACTTATGGCAGAGCATCGTCAGATGGAATGTCATCTTTTATGAGAAATGGTGGGTGGACATGGGGTGGAGGATTACTAAGTAGTATGTCAGCTTCAGTATCAACCCTCGGGGATAGTGGATGGTTACTGCACATTCAAAATGTCTTGGCCGGTTCAGCTTGGATAGCTGCTCGTGTTGCTATGGAAAAGGCTTCTGTGCTTGTACATTGCAGTGATGGATGGGATAGAACAACTCAGTTGGTTTCACTTGCTAGTTTGATGCTAGATCCATACTACAGGACATTTGAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGTTAGCATTTGGTCATCCATTTTCAGATCGCGTGGGAATGCCATCTGTCTCTGGAAGTGGCAACATGCCTTCTGAGTCGTCTAGGCAGTCTTCTAGTGGAAGTCACCTGTCATCACCCATGCGCCAGACATCAGGAACATTTAGTTCTCAACCTTCAACTTCTCACACACAGACTTCAAACAACTACTCTCCAATTTTTTTGCAGTGGGTGGATTGTGTTTCACAATTGCTGCGGACATATCCTTTTGCTTTTGAGTTCTCCTCGGCTTTCCTCGTGGACTTCTTAGACTGTGTGCTTTCTTGTCGATTTGGAAACTTCTTATGTAATAGTGAGAAGGAAAGGCAGCAATTGAATGTTTTTGAAGCTTGTGGATGTTTGTGGGCATACTTGGCTGAGTTGCGTGCTTCAGAGAGCGGTTCTCATGTGCATTATAACCTCTTTTATGAACCATCAAAGCACAATGGTCCTCTTTTGCCTCCAGCAGCAGCTTTGGCCCCAACTTTGTGGCCCCAGTTCCATCTTCGTTGGGCTTGCCCTGAAGAATCACAGGCTGGGGAGATCGAAGCAGAATGTAGGAATATGGCTTTGAAATACTCTGACATGAGGAAGGCTATCGAAGTGGAAGAAAGGAGAGCCAAAGAAATTACAAATGCTATGGAATCACTGAATGTAGAATTAAGAAACGAGAAGCAGCTAAGAGTCTCAGCTATGACTGTCATAAAAAATAAAGACAAAGAAAATGTGGCCATGAAGCGAGCATTACAGTCAATTGGGCGCAAGGTTCACTTCTCCGGCGGTGACGATTGTATTGTTGATATTGAAATCTGCCCAGCTGAAGCAGCACAGAACTTCATGTATTCGTCCACCGGAAAAGAATTTGATGATAAAAAGGATTTGTCTGCTTCAGTAACAGTTACAGAAGATGTCAATGATCCAAACAATGCTATCGGTTGGGTATGTGAAACTCTATGCCCATTTCGTACTCAAGATGGACGCTGCAGGTGGCCGTATGCTGCTTGTGCTCAAAGAGGCAGCCAGTTTGTTGGTCTAAAGGCCAATTTTGATGCGCTTGACCAACTCTCGATTGATGATGATTATTTCAAGCTTGGGTGA 2715 0.4413 MLQKMFCKVTFLSSRSLSFASYSSSLQHSCSWIPVVVVVFVFVDDDVVGPFTFAAGMASPRPHSSRSSFRDDDSDSDSTKLEGTGSWDAIEWTKIEPILPFVSHENLDFLLEAEQVKTQEHGIVLVNNNDVGTLMVTNFRLLFVSEKTTKVIALGTIPLAMIEKFSKIAVKAQSATRQSEKTPPQRLLQVIGKDMRIIVFGFRPRTKQRRVIYDSLLRLTKPASLWDLYAFVSGPSRFNNTNPKVRLLDEYFRLLGRGSYCASINMIGSGSFTLSNDLWRISSVNSNYTMCQTYPFALIIPKSISDDEVLQASTFRARCRLPVVSWCHPGTGAVLARSSQPLVGLMMNIRSNTDEKIVAALCSKLDDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSFARLREYLDTYGRASSDGMSSFMRNGGWTWGGGLLSSMSASVSTLGDSGWLLHIQNVLAGSAWIAARVAMEKASVLVHCSDGWDRTTQLVSLASLMLDPYYRTFEGFQALVEKDWLAFGHPFSDRVGMPSVSGSGNMPSESSRQSSSGSHLSSPMRQTSGTFSSQPSTSHTQTSNNYSPIFLQWVDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLCNSEKERQQLNVFEACGCLWAYLAELRASESGSHVHYNLFYEPSKHNGPLLPPAAALAPTLWPQFHLRWACPEESQAGEIEAECRNMALKYSDMRKAIEVEERRAKEITNAMESLNVELRNEKQLRVSAMTVIKNKDKENVAMKRALQSIGRKVHFSGGDDCIVDIEICPAEAAQNFMYSSTGKEFDDKKDLSASVTVTEDVNDPNNAIGWVCETLCPFRTQDGRCRWPYAACAQRGSQFVGLKANFDALDQLSIDDDYFKLG 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0962 904 PANTHER MYOTUBULARIN-RELATED 92 786 IPR030564 -
Dere06g0962 904 SUPERFAMILY PH domain-like 110 232 - -
Dere06g0962 904 MobiDBLite consensus disorder prediction 65 79 - -
Dere06g0962 904 Coils Coil 732 766 - -
Dere06g0962 904 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 274 711 IPR029021 -
Dere06g0962 904 MobiDBLite consensus disorder prediction 548 592 - -
Dere06g0962 904 ProSitePatterns Tyrosine specific protein phosphatases active site. 496 506 IPR016130 GO:0016311|GO:0016791
Dere06g0962 904 CDD PTP-MTM-like 319 609 - -
Dere06g0962 904 MobiDBLite consensus disorder prediction 57 82 - -
Dere06g0962 904 Gene3D - 115 220 IPR011993 -
Dere06g0962 904 Pfam Myotubularin-like phosphatase domain 246 649 IPR010569 -
Dere06g0962 904 ProSiteProfiles Myotubularin phosphatase domain. 256 707 IPR010569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0962 Dere-ChrDere06 17928280 17976258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0962 57 902 Protein tyrosine phosphatase (PTP) family AT3G10550 64.547 0.0 1114