Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0936 ATGAAACAGACGATAATTAAACCTAGTACCTGCAATTTGCTCAAAATGAGGAATGCTCTTCTACCAACACTGTCTTCAAGGCTTCACTGCTATGGAAACAATGAAGTTCAATTGGAGAATTTGAAAGCTTGCATACAGATGGACGACCAAAGTCATTTTCACAGTAGTGGATTATATATGGAGTGTAGAACATTCAACAATGAGAGCCAATTGGGCAAAGTAGGGTATGCAATAATGGCAAGCCAGTGTGAATCCCTTATTCAGCAAGGGAGCCTATATGGTGTATCCAGCAGCAAAGATATTTCTCAGCAATCATTGTTGCTTGCCAAGAGACTTTCTGCTTCTCAGTATGATGGAGTCAGTGGAAATGCAAGAAAACGTCCATTTGAGGCCATGGACAACATAAATCTCTTCAAAAAGATGGAAGCCACTGATCTGCAAACCAAAACTACAAACTTGGATCCAAAATGGAATCCAGCCAGAGATACATTCCAGAAAATTCCAAGGAACAAATTGCATGTGCCTGCAAGGAGAAATCAAAGGCTCAGTGATAGAGTCACAACCCTACAAAAGCTGGTTTCACCTTTTGGCAAGAGTGATACTGCCTCAGTTCTTCAAGAGGCTTCTCTCTATATCAAGCTTCTTCAAGAACAAATCCGGAAGGACTGTGGGGAGAAGCAGGTTGACCTAAGAAGCAGAGGATTATGTTTGGTTCCCATATCTATCACACAGAAAGTAACAATGGAGGATTAG 753 0.4117 MKQTIIKPSTCNLLKMRNALLPTLSSRLHCYGNNEVQLENLKACIQMDDQSHFHSSGLYMECRTFNNESQLGKVGYAIMASQCESLIQQGSLYGVSSSKDISQQSLLLAKRLSASQYDGVSGNARKRPFEAMDNINLFKKMEATDLQTKTTNLDPKWNPARDTFQKIPRNKLHVPARRNQRLSDRVTTLQKLVSPFGKSDTASVLQEASLYIKLLQEQIRKDCGEKQVDLRSRGLCLVPISITQKVTMED 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0936 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 177 223 IPR036638 GO:0046983
Dere06g0936 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 215 IPR011598 GO:0046983
Dere06g0936 250 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 60 244 - -
Dere06g0936 250 CDD bHLH_AtbHLH_like 173 221 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0936 Dere-ChrDere06 17233164 17240193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0936 165 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21340 41.739 1.18e-17 78.6