Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0930 ATGTCTTTCCAGCATAAAAGCTTTTGGATGCCACGGGATGGAGGATGCTTGGCTGAAGAAAATGTGGGATATGAAAACTCTTCCAGAATTGAACCAAAGCGTGGTCATCAGTGGTTTATGGAAACAGGTGAATCAGAAATTATCAGCAACAATAAGAAGCAGGCTATTGAAGCTGTTGGTGGCAGGCCAATTTCAGGAGCTTCACATTTGAATGTGTCCCCTTGGGACAACAATTCTGGGTTTCACTCAGTTACAGGTCAATTTTCTGATCGTCTATTTGGATCTGAGCCTGTACGGACTTTCAATTTGGTTGATAAGAACATGCCGTCAATTGGTAATGGAAATTTGAACATGGGAAGGAAGGATTTCGAGAACAATTATAGAAATGACCCACCAGTTGGGTTGTCAATATCTCATTCTATTGAGGACCCTTCATCTTGTCTCAATTTTGGTGGCATTAGAAAAGTTAAAGTTAATCAAGTCAGAGATACTAACAATTGCATGTCGGCATGTATGGGGCACTCCTATAGTAGGGCAGATAATAGTGCAATTTCAATAGGTGCTGGCTACAGTAAGAATGATGGCAATATATCATTGGGTCAGACTTATAACAGTGGAAATGAGAATATTGTCTCTATGGGAACCTCAATAACTAAGGCTGATGACAATCTTGTTTCAATGGGTCACACTTTCAACAAAGGAGATGGAAGTTTTATGTTGATGGGCCACACTTATGGCAAGGGAGATGAAAGTATCCTATCAATGGGTCAGCCCTTTGACAGGGGAGATGGAAATTTCATATCAATAGGTCAGTCATATGAAAAGGAAGATAGCAATATGATATCATTGGGCAACTCCTATAACAAAGGGCATGAAAACTTTATATCAATGGGCCCAACCTACAGTAAATCAGGAGAAAATTTCATTTCCATTGCTCCTTCCTACGATAAGGGAACTGATCATATCATATCAGTGGGTCCGACATATGACAAGGTGGATTCAAACATTGTATCAACAGACCCTTCATATGACAAAGGAGATTCTAACTCTTTACCAGTAGGTCACAATTACAATAAGAGTGAGGGCTGTACCATATCTTTTGGAGGTTTTCATGACGACCCAGAGCCAAATCCCTCTGGTGGGATTATCAGTGGCTATGATCTGTTGATGGGAAATCAGAACTCAGCTCAAGGTCTGGATGGTCAGAAGGATCTAATTGAGTCAAACCCTGTACCGATTGTAAATAGCAATACAAAGTCTAATTCTAAAACTGATCCTACCCTTAAGAATAAGGAACCAAAGACAAGCAAGAAGGTTCCTACAAATAATTTCCCTTCAAATGTCAAAAGTCTGTTATCAACTGGTATATTTGATGGTGTTCCTGTGAAGTATGTTTCTTGGTCACGGGAGAAAAATCTTAAAGGAGTCATAAAAGGGACTGGGTATTTGTGTTCTTGTGATGAATGCAAGCAGTCCAAGGCTCTTAATGCATATGAGTTCGAGCGTCATGCTGGTGCCAAGACCAAACACCCAAACAATCACATATACTTTGAGAATGGAAAAACCATTTATGCTGTTGTTCAAGAGCTGAAGAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAACTGTTACTGGATCTACCATCAACCAGAAGAATTTCCGTATCTGGAAAGCATCATACCAAGCTGCTACACGGGAACTTCAGCGTATATATGGAAAAGACGAAGTGGTCATCCCATCTTAA 1749 0.4014 MSFQHKSFWMPRDGGCLAEENVGYENSSRIEPKRGHQWFMETGESEIISNNKKQAIEAVGGRPISGASHLNVSPWDNNSGFHSVTGQFSDRLFGSEPVRTFNLVDKNMPSIGNGNLNMGRKDFENNYRNDPPVGLSISHSIEDPSSCLNFGGIRKVKVNQVRDTNNCMSACMGHSYSRADNSAISIGAGYSKNDGNISLGQTYNSGNENIVSMGTSITKADDNLVSMGHTFNKGDGSFMLMGHTYGKGDESILSMGQPFDRGDGNFISIGQSYEKEDSNMISLGNSYNKGHENFISMGPTYSKSGENFISIAPSYDKGTDHIISVGPTYDKVDSNIVSTDPSYDKGDSNSLPVGHNYNKSEGCTISFGGFHDDPEPNPSGGIISGYDLLMGNQNSAQGLDGQKDLIESNPVPIVNSNTKSNSKTDPTLKNKEPKTSKKVPTNNFPSNVKSLLSTGIFDGVPVKYVSWSREKNLKGVIKGTGYLCSCDECKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQTVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVVIPS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0930 582 MobiDBLite consensus disorder prediction 409 424 - -
Dere06g0930 582 PANTHER AUTOIMMUNE REGULATOR 8 530 - -
Dere06g0930 582 SUPERFAMILY Porins 134 353 - -
Dere06g0930 582 MobiDBLite consensus disorder prediction 399 442 - -
Dere06g0930 582 Pfam Tify domain binding domain 475 530 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0930 Dere-ChrDere06 17151673 17161303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0930 411 563 PHD Transcription Factor Family AT3G53680 47.712 9.16e-41 156