Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0925 ATGACCAAACACGCCAACAATCACCAAGTGGGGCCCATACACGACGATGGTGCAAATAAACGTGGCACTACCGGAAAGTGGTTAGACCGAATTGCTGTTGGGTCTCCAGGAGAGGCAAGCCAACCGGATGCAATTAGAGCAGCATTTGCTGAGTTCTTCTCCATGCTTATCTTCGTTTTTGCTGGCCAAGGCTCTGGCATGGCTTACGGCAAGCTTACAAACGACGGATCTGCAACGCCATCGGGAGTGATAGCTGCATCATTAGCTCATGCGTTTGGGCTAATCGTAGCAGTTTCAGTTGGAGCAAACATTTCCGGTGGTCACGTGAATCCTGCGGTCACGTTCGGAGCCTTCTTAGGAGGAAACATAACCCTCTTGAGAAGCATTCTGTATTGGATTGCGCAGTTGCTCGGTTCCACTGTTGCTTGCATGCTCCTCAAGTTCGCCACCGGTGGACTGGAAACATCAGCCTTTGCTCTATCCTCTGGAGTGACAGTGTGGAACGCTCTTGTTTTTGAGATTGTGATGACCTTTGGGTTGGTATACACAGTGTACGCCACAGCAGTGGACCCAAAGAGAGGGAACGTGGGGGTCATTGCTCCGATCGCGATTGGGTTCATTGTGGGTGCGAACATCTTAGCCGGGGGTGCGTTCGACGGTGCGTCCATGAACCCAGCTGTGTCCTTTGGCCCAGCACTGGTTAGCTGGTCATGGACCCACCACTGGGTCTACTGGCTCGGTCCCTTCATTGGTGCAGCGATCGCAGCCATTGTGTATGACAACATCTTCATTGGTGACGATGGCCATGAACGCCTCTCCAGCAGCGACTTTTAA 834 0.524 MTKHANNHQVGPIHDDGANKRGTTGKWLDRIAVGSPGEASQPDAIRAAFAEFFSMLIFVFAGQGSGMAYGKLTNDGSATPSGVIAASLAHAFGLIVAVSVGANISGGHVNPAVTFGAFLGGNITLLRSILYWIAQLLGSTVACMLLKFATGGLETSAFALSSGVTVWNALVFEIVMTFGLVYTVYATAVDPKRGNVGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWTHHWVYWLGPFIGAAIAAIVYDNIFIGDDGHERLSSSDF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0925 277 ProSitePatterns MIP family signature. 108 116 IPR022357 -
Dere06g0925 277 CDD MIP 46 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0925 277 PANTHER AQUAPORIN-8 31 271 IPR034294 -
Dere06g0925 277 MobiDBLite consensus disorder prediction 1 22 - -
Dere06g0925 277 FunFam Probable aquaporin TIP1-1 29 276 - -
Dere06g0925 277 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0925 277 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0925 277 PRINTS Major intrinsic protein family signature 242 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0925 277 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0925 277 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0925 277 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0925 277 SUPERFAMILY Aquaporin-like 41 265 IPR023271 -
Dere06g0925 277 Pfam Major intrinsic protein 39 259 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere06g0925 277 Gene3D Glycerol uptake facilitator protein. 29 277 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0925 Dere-ChrDere06 16964303 16966440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0925 28 277 Major Intrinsic Protein MIP AT4G01470 82.000 4.26e-151 421