Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0918 ATGGAGATAACATACGCATCGCCAAGTAGCACCAACCTAGCCGGCCAAAATTCCTCCATGCCGGAGCCGGCGTCGGCCACGGGGACGACTACACGCCCCGTCAGGATCATCCCCCTGCAGCATCCCACCATTAAGATGACGTCGTCGTCGTCGTCGTCGTCTCCTGCTTATCTCAATTCTGTGTTCTCCAAGTGGGCCACGAAGCTCCGAGGAATGACTTGGGTTGAATGGATCGAGCTCTTCCTCCCTTGCTTCCGCTGGATTCGGACCTATAAATGGCGCGAGTATTTTCAGGTGGATCTCATGGCTGGAATCACAATTGGTGTCATGCTTGTTCCTCAGGCAATGTCCTATGCAAAACTAGCTGGACTTCAGCCAATATATGGACTTTATTCTGGCTTTGTGCCTGTATTTGTATACGCCATATTTGGGTCATCTCGTCAGCTTGCAGTTGGTCCAGTAGCACTAGTTTCTCTCTTGGTCTCTAATGTGCTTGGTAGCATCACTGATTCATCCAGTGATTTATACACAGAGTTGGCAATTTTGTTGGCTCTTATGGTTGGGATACTGGAGTGCATAATGGGACTCCTAAGGTTGGGATGGCTGATTCGCTTCATTAGCCATTCAGTGATTTCTGGCTTTACTACAGCTTCTGCTATTGTTATTGGTTTATCTCAGGCAAAATACTTCTTGGGTTATGATATAGACAAAAGTAGCAAGATTGTGCCATTGGTTAAGAGTATAATAGCTGGATTTGATAAGTTTTTGTGGCCCCCTTTTGTGATGGGATCGGTGATACTAACAATACTACTTACCATGAAGCAGCTGGGGAATACACGGAAGTACTTGCGGTTCCTGAGAGCCGCAGGGCCTCTCACTGCAGTAGTTCTGGGAACAGCTTTCGTAAAAATATTCCATCCATCATCCATTTCTTTGGTGGGAGATATACCTCAAGGCCTGCCAAAATTTTCTGTTCCCAGAGCTTTTAGTTATGCAGTTTCCTTAATTCCAACTGCATTTCTCATCACTGGGGTGGCTATATTGGAATCTGTGGGGATTGCCAAAGCATTAGCAGCAAAAAATGGGTATGAGTTGGATTCAAATCAAGAGTTGTTCGGTCTAGGTGTTGCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCAACAACAGGATCCTTTTCAAGGTCAGCTGTCAGTCATGAAAGCGGTGCAAAATCTGGAATATCTGGGATTGTGACAGGAATCATAATAACCTGTGCACTTTTGTTCCTGACTCCATTATTTAAGTACATTCCTCAGTGTGCTCTTGCTGCCATAGTGATCTCTGCTGTGATTGGTCTGGTGGATTATGAGGAGGCCATTTTCTTGTGGCGTGTAGACAAAAAAGATTTTCTTCTTTGGATCATCACTAGTACTACAACTTTGTTCCTTGGTATTGAGATTGGTGTACTTGTTGGGGTTGGTGCTTCACTAGCTTTTGTCATTCATGAGTCTGCGAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACTGTTTATAGAAATATTAAACAATATCCTGAAGCATACACATACAATGGAATTGTAATTGTTCGTATTGATGCTCCCATTTATTTTGCAAACATTAGTTACATAAAGGACAGGTTGCGAGAATATGAAGTTTATGTTGATAGTTCAACAAGACGTGGACCAGAGGTAGAAAGAATTTATTTTGTGATTCTAGAAATGGCCCCTGTGACCTATATAGACTCCAGTGCGGTTCAGGCTTTGAAAGACTTACATCAGGAGTACAAGTTACGGGGCATCCAGATTGCAATATCCAATCCAAACCCAGAAGTTTTGCTTACCTTATCCAGTTCTGACGTGGTGGATCTTATAGGCAAAGAATGGTACTTTGTAAGAGTACATGATGCTGTTCAAGTTTGCTTGCAGCATGTTCAGCGCTTAAGAGAGATGCCGAGGACTACACAAGCTTCTCTCTCTCTCCCTGCAGATAATCCAAGTTTATTTGAGAGGTTACTGAAACAAAGAGGGGAGAGCCTTCCAAGAGCCGATTTGGAGTCTGGTAACGGCAAGCGTCCGCTCTCCAAGGACACAGAATCCCAATTGGAGCCATTATTGTCAAGAAAATCTTGA 2142 0.4393 MEITYASPSSTNLAGQNSSMPEPASATGTTTRPVRIIPLQHPTIKMTSSSSSSSPAYLNSVFSKWATKLRGMTWVEWIELFLPCFRWIRTYKWREYFQVDLMAGITIGVMLVPQAMSYAKLAGLQPIYGLYSGFVPVFVYAIFGSSRQLAVGPVALVSLLVSNVLGSITDSSSDLYTELAILLALMVGILECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDIDKSSKIVPLVKSIIAGFDKFLWPPFVMGSVILTILLTMKQLGNTRKYLRFLRAAGPLTAVVLGTAFVKIFHPSSISLVGDIPQGLPKFSVPRAFSYAVSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANVLGSFFSAYPTTGSFSRSAVSHESGAKSGISGIVTGIIITCALLFLTPLFKYIPQCALAAIVISAVIGLVDYEEAIFLWRVDKKDFLLWIITSTTTLFLGIEIGVLVGVGASLAFVIHESANPHIAVLGRLPGTTVYRNIKQYPEAYTYNGIVIVRIDAPIYFANISYIKDRLREYEVYVDSSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLHQEYKLRGIQIAISNPNPEVLLTLSSSDVVDLIGKEWYFVRVHDAVQVCLQHVQRLREMPRTTQASLSLPADNPSLFERLLKQRGESLPRADLESGNGKRPLSKDTESQLEPLLSRKS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0918 713 SUPERFAMILY SpoIIaa-like 522 644 IPR036513 -
Dere06g0918 713 CDD STAS_SulP_like_sulfate_transporter 521 637 - -
Dere06g0918 713 ProSitePatterns SLC26A transporters signature. 126 147 IPR018045 GO:0008271|GO:0008272
Dere06g0918 713 MobiDBLite consensus disorder prediction 1 32 - -
Dere06g0918 713 Pfam STAS domain 521 640 IPR002645 -
Dere06g0918 713 MobiDBLite consensus disorder prediction 682 713 - -
Dere06g0918 713 NCBIfam sulfate permease 83 640 IPR001902 GO:0016020|GO:0055085
Dere06g0918 713 PANTHER SULFATE TRANSPORTER 60 647 IPR001902 GO:0016020|GO:0055085
Dere06g0918 713 ProSiteProfiles STAS domain profile. 520 644 IPR002645 -
Dere06g0918 713 Gene3D STAS domain 500 648 IPR036513 -
Dere06g0918 713 FunFam Sulfate transporter 31 500 647 - -
Dere06g0918 713 MobiDBLite consensus disorder prediction 692 713 - -
Dere06g0918 713 Pfam Sulfate permease family 97 470 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0918 Dere-ChrDere06 16711686 16723205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0918 31 649 Inorganic Solute Cotransporters AT5G13550 77.221 0.0 964