Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0910 ATGGGCATTTTGCTGTCTCTCCCATTTTGCCCTAGGGTTTCTTGCGAACAAGGAGGGGAAGAGGCGCCGCTGCAATTCAAAGCGTGGGAGAACACAGCAATGGGTATTCCCAGAACCATCTCGAGGATCAAGGTTCATGAGTTAAGGCAGAAGACGAAGGCTGAGCTGCTGAACCAGCTCAAGGATCTCAAGGCTGAGCTTGCTCTTCTCCGTGTTGCTAAGGTCACCGGCGGTGCACCCAACAAACTATCCAAGATAAAGGTGGTAAGGTTGTCCATAGCCCAGGTATTGACGGTGATATCTCAGAAGCAGAAGGCTGCGTTAAGGGAAGCATATAAGAATAAGAAGTACTTGCCTCTTGATCTGCGTCCTAAGAAGACTAGGGCCATTCGCAGAAGGCTTACGAAGCACCAGGCATCATTGAAGACTGAACGAGAGAAGAAGAAGGATACATACTTTCCGATGAGGAAATTTGCTATTAAGGTGTAG 489 0.4847 MGILLSLPFCPRVSCEQGGEEAPLQFKAWENTAMGIPRTISRIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDTYFPMRKFAIKV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0910 162 Gene3D - 40 116 IPR036049 GO:0003735|GO:0005840|GO:0006412
Dere06g0910 162 Coils Coil 46 73 - -
Dere06g0910 162 FunFam 60S ribosomal protein L35 117 162 - -
Dere06g0910 162 Gene3D - 117 162 - -
Dere06g0910 162 Pfam Ribosomal L29 protein 47 103 IPR001854 GO:0003735|GO:0005840|GO:0006412
Dere06g0910 162 CDD Ribosomal_L29_HIP 47 103 - -
Dere06g0910 162 Hamap 50S ribosomal protein L29 [rpmC]. 43 103 IPR001854 GO:0003735|GO:0005840|GO:0006412
Dere06g0910 162 NCBIfam 50S ribosomal protein L29 47 103 IPR001854 GO:0003735|GO:0005840|GO:0006412
Dere06g0910 162 PANTHER 60S RIBOSOMAL PROTEIN L35 41 162 IPR045059 GO:0000463|GO:0022625
Dere06g0910 162 SUPERFAMILY Ribosomal protein L29 (L29p) 43 104 IPR036049 GO:0003735|GO:0005840|GO:0006412
Dere06g0910 162 FunFam 60S ribosomal protein L35 40 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0910 Dere-ChrDere06 16570066 16572843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0910 40 162 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 86.992 2.19e-71 209