Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0906 ATGATCACAAATACGAACCCTGCAGGCCCAGGCACTGTAGCCTCCTCTGACTCAACCACAGCTTCTGCGTCTTCCAATGACAAAGATTCATCATCCCGCTCTTCCTTCACTCCGCCTTTCGCCGATGCCGATCAGCCCGCTCCGCCACCGGCTCCGAACATCGTGATGTCCTCTAAGGATCCCAATTCTCTCTTTAGCGGTGGTGGGGTCAGCTGTCTCTCAGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGACTTCAATGGAGGATTTCTATGAGACAAGTATATCAGAGGTTGACGGTCAGATGGTTGCTTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCACGGACTGCTGAATACTTGAAAAAAAATCTCTTCAAGAATATTAGTAGCCATCCTGACTTTATCAAAGACCCAAAGACAGCTATCGTTGAAGCATTTAAACAGACAGATGTTGATTACCTTAAAGAGGAAAAGGGTTATCATAGGGATGCTGGGTCCACTGCATCAACAGCTGTTTTGTTGGGGGATCGAATTGTTGTTGCCAATGTTGGTGATTCCAGAGTAGTTGCTTCCAGAGCTGGTTCAGCTGTCCCTTTGTCGATTGATCACAAGCCTGATAGATCTGATGAACGTCAGAGGATTGAAGAGGCTGGGGGATTCATCATTTGGGCAGGCACATGGCGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTCCTTAAACCATATGTTGTTGCTGACCCAGAAATTCAGGAAGAAGAGATTGATGGTGTAGATTTTATAATAATAGCTAGCGATGGACTTTGGAATGTCATATCAAACAAGGAAGCTGTGTCTTTGGTGCAAAACGTCACAGATGCAGAAGTGGCATCCAGAGAACTTATTAAACACGCTTACACACGAGGAAGCTCAGACAACATCACTTGCGTTGTTGTTCGTTTTGATTCATCTTGA 993 0.4532 MITNTNPAGPGTVASSDSTTASASSNDKDSSSRSSFTPPFADADQPAPPPAPNIVMSSKDPNSLFSGGGVSCLSGSRNGRFSYGYSSFKGKRTSMEDFYETSISEVDGQMVAFFGVFDGHGGSRTAEYLKKNLFKNISSHPDFIKDPKTAIVEAFKQTDVDYLKEEKGYHRDAGSTASTAVLLGDRIVVANVGDSRVVASRAGSAVPLSIDHKPDRSDERQRIEEAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNVTDAEVASRELIKHAYTRGSSDNITCVVVRFDSS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0906 330 CDD PP2Cc 81 327 IPR001932 -
Dere06g0906 330 SMART PP2C_4 72 325 IPR001932 -
Dere06g0906 330 FunFam probable protein phosphatase 2C 59 74 330 - -
Dere06g0906 330 Gene3D - 75 330 IPR036457 -
Dere06g0906 330 ProSitePatterns PPM-type phosphatase domain signature. 113 121 IPR000222 GO:0043169
Dere06g0906 330 Pfam Protein phosphatase 2C 83 320 IPR001932 -
Dere06g0906 330 MobiDBLite consensus disorder prediction 1 39 - -
Dere06g0906 330 MobiDBLite consensus disorder prediction 1 60 - -
Dere06g0906 330 PANTHER PROTEIN PHOSPHATASE 37 327 IPR015655 GO:0004722|GO:0006470
Dere06g0906 330 SUPERFAMILY PP2C-like 74 328 IPR036457 -
Dere06g0906 330 ProSiteProfiles PPM-type phosphatase domain profile. 82 327 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0906 Dere-ChrDere06 16480001 16498912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0906 54 330 PP2C-type Phosphatase Gene Family AT1G43900 72.202 1.44e-153 434