Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0895 ATGTCGTCTCGCATAGTTGCAGAAGACGCGGATACGGCGTCGTATATGAGTTCCATCGAGCTCAACCACCTCTCCGATCACTCTCCCACGCTCGGGCAACTCCTCAAGCATGTCGGAGACGTACGCAAGGAAGCCACCGGAGACGGGTGTGAGACGCCGCTTCACCACGCTCTTGACGTAGGCGATGCTGATGGGGGGATTGAGCCTCGGTCTCCTCCCTTCGTGCTGTCGTTTAGTAATCTTACGTACAGCGTCAAGGTCCGCCGAAAATTGAGCTTCTCGGCGTTGTTTCGGCGGCGGACGAATCGTCTTGGAGCCGCCACGGTTGACGAGCCGGTGGCTGACGAGAGGTTGTTCTCGAGAACAAAGACCTTGCTGGATGATATCTCCGGCGAGGTTCGCGACGGCGAGATCGTCGCCGTCATGGGTGCTAGTGGTTCCGGCAAGTCCACCCTCATCGACGCCTTGGCCAACCGTATAGCAAAGGGAAGCTTGAAAGGGAGTGTGACTCTGAACGGTGAGGCCATGAACTCGCGGCTTCTGAAGGTGATTTCGGCATACGTAATGCAGGACGATCTGTTGTTCCCAATGCTCACCGTGGAAGAGACTCTCATGTTCGCAGCAGAGTTCCGATTGCCTCGTACCCTCTCGAAATCCAAGAAGAAAATGCGAGTCCAAGCGCTAATCGACCAGCTGGGCCTTCGAAATGCTGCGAACACCGTCATCGGGGACGAAGGCCACCGCGGGGTCTCCGGAGGCGAGCGGCGGCGCGTGTCCATCGGCATTGACATAATTCACGACCCCATCATCCTGTTCCTCGACGAACCCACCTCCGGACTGGACTCCACCAGCGCGTTCATGGTGGTCAAGGTGCTGCAGAGAATCGCGCAGAGCGGAAGCATCGTGGTCATGTCCATACACCAGCCGAGTTACAGAATCCTCGGACTCCTCGACCGAATGATCTTCTTGTCGCGCGGAAAAACAGTCTACAGTGGTTCGCCCATGCAGCTTCCCACCTTCTTCGCCGAATTCGGCCACCCCATACCGGAAAACGAGAATCGAACGGAGTTCGCGTTGGATCTGATTCGCGAACTCGAGGGGTCACCCGGTGGTACCAAGAGCTTAGTGGAGTTCAACAAATCATGGCAGAACAAGAAGCATGTTGAAAACAAAACCAGTTTCAATCATGGACATGGTTTATCTCTGAAAGAAGCAATCAGCGCGAGCATTTCCAAAGGAAAATTAGTCTCTGGCGCTACAAACACAAGCACTAGCACCACCAACACGAACACGACCACATGGATGGTACCGAAATATGCGAACTCATTCTGGATTGAAATGGCCACACTCTCAAAACGATCATTCACCAATACACGACGAATGCCTGAGCTCTTCGGGATGCGACTGAGCACCGTTCTGGTCACCGGATTCATCTTAGCCACCATGTTCTGGCAACTAGATAACTCTCCAAAAGGAGTCCAAGAAAGACTCGGCTTCTTCGCATTCGCCATGTCCACCACCTTCTACACCACAGCCGACGCACTCCCTGTGTTCCTTCAAGAGCGATATATCTTCATGAGAGAAACATCGCACAACGCTTATCGGCGATCGTCCTACCTCGTCTCTCACGCGCTCGTGGCCTTTCCTCCATTAATCTTCCTCTCCTTGGCCTTCGCCGCCACCACCTTCTGGGCGGTGGGCCTTGACGGCGGATTCTCCGGGTTTGCGTTCTACTTCGTCATCATCCTCGCCTCCTTCTGGGCTGGAAACTCCTTCGTCACCTTCCTCTCCGGCCTCGTCCCTCACGTGATGTTGGGCTACACAATAGTGGTCGCCATACTAGCCTACTTCTTACTCTTCAGTGGCTTCTTCATAAACCGAGATCGAATCCCTTCGTACTGGATATGGTTCCACTACATCTCCCTGGTGAAGTACCCATACGAGGCCGTTCTGCAGAACGAGTTCGACGACCCAGTTAAGTGCTTTGTGAAAGGAGTTCAGATCTTCGATAACACACCACTTGGGTCTGTGCCGAATTACATGAAGTTGAAGCTGTTGAAGAGTATGAGTGAGACTCTGGGTGTGAACATCACAAGCTCGACATGCTTGACCACTGGTTCGGATATACTGCAACAGAATGGAGTAATGGATTTGAGCAAATGGAACTGCTTGTGGATCACTGTGGCTTGGGGTTTCTTCTTTAGGATTCTGTTTTACATCTTGTTATTGTTGGGTAGTAAGAACAAAAGAGCGTAA 2256 0.5288 MSSRIVAEDADTASYMSSIELNHLSDHSPTLGQLLKHVGDVRKEATGDGCETPLHHALDVGDADGGIEPRSPPFVLSFSNLTYSVKVRRKLSFSALFRRRTNRLGAATVDEPVADERLFSRTKTLLDDISGEVRDGEIVAVMGASGSGKSTLIDALANRIAKGSLKGSVTLNGEAMNSRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKMRVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVVMSIHQPSYRILGLLDRMIFLSRGKTVYSGSPMQLPTFFAEFGHPIPENENRTEFALDLIRELEGSPGGTKSLVEFNKSWQNKKHVENKTSFNHGHGLSLKEAISASISKGKLVSGATNTSTSTTNTNTTTWMVPKYANSFWIEMATLSKRSFTNTRRMPELFGMRLSTVLVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETSHNAYRRSSYLVSHALVAFPPLIFLSLAFAATTFWAVGLDGGFSGFAFYFVIILASFWAGNSFVTFLSGLVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYISLVKYPYEAVLQNEFDDPVKCFVKGVQIFDNTPLGSVPNYMKLKLLKSMSETLGVNITSSTCLTTGSDILQQNGVMDLSKWNCLWITVAWGFFFRILFYILLLLGSKNKRA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0895 751 SMART AAA_5 135 327 IPR003593 GO:0016887
Dere06g0895 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 341 IPR027417 -
Dere06g0895 751 Pfam ABC-2 type transporter 307 392 IPR043926 GO:0140359
Dere06g0895 751 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 91 350 IPR003439 GO:0005524
Dere06g0895 751 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 56 738 - -
Dere06g0895 751 Pfam ABC-2 type transporter 449 655 IPR013525 GO:0016020|GO:0140359
Dere06g0895 751 ProSitePatterns ABC transporters family signature. 250 264 IPR017871 GO:0005524|GO:0016887
Dere06g0895 751 Gene3D - 117 341 IPR027417 -
Dere06g0895 751 FunFam ABC transporter G family member 6 115 341 - -
Dere06g0895 751 Pfam ABC transporter 126 278 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0895 Dere-ChrDere06 16239681 16241936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0895 125 310 Calmodulin-binding Proteins AT2G36910 29.101 4.45e-10 61.6