Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0887 ATGGCTGGGCCTGGGCAATCATACTGTTTGAGAGGTCTTGTTTTGATGTTGGTGGTGTTAGGCACAACATGCGAAGCTAAACTATCTCCCAATTTCTACGACAAGACATGCCCTAATGCTCTGTCCACCATCAGATCTGTCATTCGGAGAGCAGTGTCCAAGGAACGACGCATGGCTGCTTCTCTCATCCGCCTTCATTTCCACGATTGCTTTGTCCAGGGTTGTGATGCATCAATATTGCTGGATGACAGCCCCTCTTTCGAGAGCGAAAAGACTGCACTCCCCAATGTTGGCTCTGTCAAAGGTTTCAACATTATTGATCAAGCCAAGGCAGCAGTCGAACAAATATGCCCTGGAGTTGTTTCATGTGCAGATATACTCGCGGTTGCAGCAAGAGATGCATCATTTTCTGTGGGTGGTCCATCATGGACTGTCAAACTCGGACGTAGAGATTCTACCACAGCAAACAAAGATTTGGCTAACAGTGACCTTCCGAAATTCACAGATAGCCTTGAAACCCTTATATCTCGTTTTGATAAGAAAGGACTAAGCCCAAGAGACATGGTTGCCCTATCAGGGTCTCATACAATAGGGCAAGCTCAATGTTTTACATTTCGTGAAAGAATTTACAACAACAGCGACAATAACATAGATGCTGGGTTTGCGTCTACTCGCCAACGAACTTGTCCAATGGCAAGTAGCCCTGAGAACAACAAAAAGTTGGCTCCTCTTGACCTGGTCACACCTAACTCCTTCGACAACAATTACTTTAAGAACTTGATTCGAAAGAAGGGTCTTCTTCCATCCGATCAAGTCCTCTTCAATGGTGGATCTACTGACAATATTGTGGTTGAATACAGTACAAATCCAACAACCTTTAAATCCGACTTCGCTTCCGCCATGATCAAGATGGGAGACATTCAACCTTTAATTGCCTCACCTGGGGTAGTCAGAAAGGTTTGCAGTGCTGTCAACTAG 978 0.4509 MAGPGQSYCLRGLVLMLVVLGTTCEAKLSPNFYDKTCPNALSTIRSVIRRAVSKERRMAASLIRLHFHDCFVQGCDASILLDDSPSFESEKTALPNVGSVKGFNIIDQAKAAVEQICPGVVSCADILAVAARDASFSVGGPSWTVKLGRRDSTTANKDLANSDLPKFTDSLETLISRFDKKGLSPRDMVALSGSHTIGQAQCFTFRERIYNNSDNNIDAGFASTRQRTCPMASSPENNKKLAPLDLVTPNSFDNNYFKNLIRKKGLLPSDQVLFNGGSTDNIVVEYSTNPTTFKSDFASAMIKMGDIQPLIASPGVVRKVCSAVN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0887 325 FunFam Peroxidase 31 173 - -
Dere06g0887 325 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PANTHER PEROXIDASE 72-RELATED 25 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Dere06g0887 325 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Dere06g0887 325 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 CDD secretory_peroxidase 27 324 IPR033905 GO:0004601|GO:0042744
Dere06g0887 325 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 Gene3D Peroxidase, domain 2 165 304 - -
Dere06g0887 325 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g0887 325 FunFam Peroxidase 165 304 - -
Dere06g0887 325 Gene3D - 31 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0887 Dere-ChrDere06 16072300 16073634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0887 6 325 Peroxidase AT1G14550 62.963 8.10e-149 419