Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere06g0880 | ATGGTTATGCTGCTTCGGGTGTCCTCATCTCTCACTGTAACGCGAGACCTTTCGGCGCCTTCTCCTCTTGGTCCTTCTTCTTCTGAAACCGCATCCATAAAATTCTCGCGCGCCCATTTGGGACATTCGCTTAAGCTTCAGCTTCATCCTCAGCTTCGGTCAGCGTCTCAAGCAAATCGGCCTGGTTTGTCTCCTACTGGACCCAGAGCGATGGCAACTAGTGTGCAAGAAGTTCTTCCCCCACCCCTTACTTCGACTTCAGCCCCACCTTCCTTATTTGATGGGACTACAAGGTTGTATATCTCTTACAGTTGCCCCTATGCACAGCGTGTCTGGATCACCCGTAATTGTAAGGGATTACAGGACAAATTACAACTGGTTCCTATTGATCTACAAGATAGGCCTGCCTGGTATAAGGAGAAAGTATACCCACCAAACAAGGTTCCTTCTTTGGAACACAATAACGAAATCAGAGGAGAGAGTGTTGATTTGATGAAATATATTGACAGCAACTTCGAGGGGCCCTCACTTCTCCCTGATGATCCCGCTAAGAGGGAGTTTGCTGAAGAGTTACTATCTTACACTGATACTTTTTACAAGACTGTCGTTTCTTCATTTAAAGAAGATCAAAATGTGACAGAAGCAGGTACTGCATTTGATTATATCGAAACTGCTCTCTCCAAATACGATGGACCTTTCTTCCTTGGCCAATTCAGTTTGGTGGATATTGCTTATGCTCCCTTCATTGAAAGATTTCAACCATTTCTAATCGATGTGAAGAATTATGATATTGCAGCTGGCAGGTCTAAACTAGCAGCATGGATTGAGGAGATGAACAAAATTGATGCATACAAACAAACCTGTCGTGACCCGAAGGAGCTTGTCGAAAGATACAAGAAACGGTTCTTGGCACGTCTATGA | 921 | 0.4452 | MVMLLRVSSSLTVTRDLSAPSPLGPSSSETASIKFSRAHLGHSLKLQLHPQLRSASQANRPGLSPTGPRAMATSVQEVLPPPLTSTSAPPSLFDGTTRLYISYSCPYAQRVWITRNCKGLQDKLQLVPIDLQDRPAWYKEKVYPPNKVPSLEHNNEIRGESVDLMKYIDSNFEGPSLLPDDPAKREFAEELLSYTDTFYKTVVSSFKEDQNVTEAGTAFDYIETALSKYDGPFFLGQFSLVDIAYAPFIERFQPFLIDVKNYDIAAGRSKLAAWIEEMNKIDAYKQTCRDPKELVERYKKRFLARL | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere06g0880 | 306 | FunFam | Glutathione S-transferase L2, chloroplastic | 70 | 173 | - | - | |
| Dere06g0880 | 306 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 73 | 302 | IPR044629 | GO:0004364 | |
| Dere06g0880 | 306 | Gene3D | Glutaredoxin | 70 | 173 | - | - | |
| Dere06g0880 | 306 | Pfam | Glutathione S-transferase, N-terminal domain | 99 | 175 | IPR004045 | - | |
| Dere06g0880 | 306 | Pfam | Glutathione S-transferase, C-terminal domain | 212 | 276 | - | - | |
| Dere06g0880 | 306 | SFLD | Main (cytGST) | 98 | 280 | - | - | |
| Dere06g0880 | 306 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 181 | 302 | IPR010987 | - | |
| Dere06g0880 | 306 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 95 | 176 | IPR004045 | - | |
| Dere06g0880 | 306 | CDD | GST_C_Lambda | 181 | 299 | - | - | |
| Dere06g0880 | 306 | SUPERFAMILY | Thioredoxin-like | 88 | 177 | IPR036249 | - | |
| Dere06g0880 | 306 | SUPERFAMILY | GST C-terminal domain-like | 172 | 302 | IPR036282 | - | |
| Dere06g0880 | 306 | Gene3D | - | 174 | 306 | - | - | |
| Dere06g0880 | 306 | FunFam | Lambda class glutathione S-transferase | 174 | 305 | - | - | |
| Dere06g0880 | 306 | SFLD | Glutathione Transferase (cytosolic) | 98 | 280 | IPR040079 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere06g0880 | Dere-ChrDere06 | 15940919 | 15947795 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere06g0880 | 81 | 304 | Glutathione S-transferase Gene Family | AT3G55040 | 65.778 | 4.87e-106 | 309 |