Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0874 ATGGGGTTAATTCAGATGAACAACGTTGAGGGTTCTGCGATTCCAAAACGACCAGCAGAACTCAATCAACATATGCGAGATGAGCAAAATGCGAGGGGTGAGGTTACTGGGGAAGGGCAGGAACTATTGGCGGAGGATGAGTTACGGATCAACGACAACGTCGGTGATGAAAACGACGGAAGAATGGTGGTTCTTAAGATTGAAAACCACATCAATCAGTCGGACCCTATAAAAAGAAACACGCAGCAACAAACCCAGGGGCCTCTGGTTCGCTGGGAGAGGTTCTTGCCAGTTAGATCGTTGAAGGTCTTATTGGTTGAGAATGACGACTCGACTCGCCACGTGGTCTGCGCTTTGCTTCGGAACTGTGGTTATGAAGTTGTAGCTGTTGCAAACGGTCTGCAAGCGTGGAAAGTCCTTGAAGATCTCACTGCAAATATTGATCTTGTTTTGACTGAGGTAGTCTTGCCATGTTTAACAGGCATTGGCCTCTTATCCAAGATTATGAGCCACAAAAGTTGCAAAAACATTCCTGTGATTATGATGTCATCTCATGATTCTATGAGTGTAGTATTTAAGTGTTTGTCCAGGGGTGCAGTTGACTTTTTAGTCAAGCCTATTCGAAAAAATGAGCTTAGAAACCTTTGGCAGCATGTTTGGAGGAAATGCCATAGCTCTAGTGGTAGTGGAAGTGAAAGTGGTGTACGCACTCAAAAGTCTTTGAAGTCGGAAAGTGGGGAACATTCCGACAACAAGCGTGGCAACTATGATGAAGATGATATTGGAAGTATTGGCTTGAATGCAAAAGATAGAAGTGATAATGGAAGTGGCACCCAGAGTTCTTGGACCAAGATGGCAGTTGAAGTTGATAGCCCACGACCAATGTCCCCTTGGGAAAAGTTGGAGGATCCACCAGCCAGTGGCACTTGCGCCCAAGTTATTCATTTAATGCCTAAAACAACTGCCAACAATCAGATGCCTTCAACAAAGGATTGTGAGAAGGATGCGCTTACTTTGGACAAGGTGACAGATACAGATTTGGAGATAGCAGTACCTAGATCTATCCCAACTTTGCTGCCGTTTGGACAATGGGAGGAAGGACCATCTAATGTAACAGCTTATAACAATAAAAGAAGCTCTGAGAAGGAAAAAGTTGATGGTGAGCAAGAAAAGGGGCAGGTTGAGCTAAATAGGACTGAGAGATCAATTGCAGACTGCAAAATTCTAGAGACTAATCCAACAGGTGTTGTCACTGACATTAATTCGAATTCTGATCCCCTCTTAGAAATTCAAGTTTTAGACAACCCAAATGGATTTTTCTCTAATGTGAAAGATAAGAATATGTACGGAGGCAAGGAAGTGCCTTCATTTCAGTTCAGTTCAAAGAGTTTGAATGGGACTGCACACCTTGGGAGTAGCGCACAAGATCAAAGTATTGTGAAGCAATCACACCGTTCTGCCTTCTCAAGGTACAACCCAGCATCTCATCAAGCTCCTACAGGGAACGTTGGAAGCTGTTCACCCATTGATAACAGCTCAGAGGCAGCAAAAACAGAATCAATGCAAGGCATGCGAACTTATTTGAATTGCATGCCTCCCAATCAACATTCCAATGGAAGTAATAACAGTAATGACATGGGCTCCAGTACAAACATTGCCTTCACCAACAAACCTTCGGCAGCCATTGATGAGCCAGCACTGAAGGCAACCATCAAATCTCTACAGCCCTCTTCAGCATTCCAACCTGCTGAAAATGTATCTCCTCAAACTGTAGCTCAAGAAAATGACGATAAGCAACATATACAAGTGCAGCACCATCACCATCATCACCACCATCGCCACCACCATCGCCACCATTATCACATGCATAATGTTGATCAACTAGTCAACCAAAATGGTCAGTCTCTACAGAACAAGACAACCACATCTTTTCATGAAAGCTCACCTAATCCCTTGAGTGCACCCATTAAGAGCGATGCTGGAAACCAAAGTTTGAATGGAAGTGCCTCAGGGAGTCACCATGGGAGCAATGCCCATGTTGGGAACAATGTCATTTTGCTAAGCAGAGCAGGAAACGTGGAAAATGATGTTAGACAATCTGAAAGAATGGGCACTACTAGTGGCATAAGATTTGAGACTCCAAATGCACCCATTGAAAATCGATTTGCACAAAGGGAGGCTGCTTTGAATAAATTTCGCCAGAAGAGGAAAGAAAGATGCTTTGAGAAAAGGGTTCGATACCAGAGTAGGAAGAAACTAGCAGAACAAAGGCCTCGAGTCCGTGGACAATTTGTACGTCATGCAGTTGAAGAAAATAAAGGAGAAGGCACACTTCAATAA 2340 0.4376 MGLIQMNNVEGSAIPKRPAELNQHMRDEQNARGEVTGEGQELLAEDELRINDNVGDENDGRMVVLKIENHINQSDPIKRNTQQQTQGPLVRWERFLPVRSLKVLLVENDDSTRHVVCALLRNCGYEVVAVANGLQAWKVLEDLTANIDLVLTEVVLPCLTGIGLLSKIMSHKSCKNIPVIMMSSHDSMSVVFKCLSRGAVDFLVKPIRKNELRNLWQHVWRKCHSSSGSGSESGVRTQKSLKSESGEHSDNKRGNYDEDDIGSIGLNAKDRSDNGSGTQSSWTKMAVEVDSPRPMSPWEKLEDPPASGTCAQVIHLMPKTTANNQMPSTKDCEKDALTLDKVTDTDLEIAVPRSIPTLLPFGQWEEGPSNVTAYNNKRSSEKEKVDGEQEKGQVELNRTERSIADCKILETNPTGVVTDINSNSDPLLEIQVLDNPNGFFSNVKDKNMYGGKEVPSFQFSSKSLNGTAHLGSSAQDQSIVKQSHRSAFSRYNPASHQAPTGNVGSCSPIDNSSEAAKTESMQGMRTYLNCMPPNQHSNGSNNSNDMGSSTNIAFTNKPSAAIDEPALKATIKSLQPSSAFQPAENVSPQTVAQENDDKQHIQVQHHHHHHHHRHHHRHHYHMHNVDQLVNQNGQSLQNKTTTSFHESSPNPLSAPIKSDAGNQSLNGSASGSHHGSNAHVGNNVILLSRAGNVENDVRQSERMGTTSGIRFETPNAPIENRFAQREAALNKFRQKRKERCFEKRVRYQSRKKLAEQRPRVRGQFVRHAVEENKGEGTLQ 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0874 779 Gene3D - 100 254 - -
Dere06g0874 779 MobiDBLite consensus disorder prediction 578 620 - -
Dere06g0874 779 SUPERFAMILY CheY-like 99 224 IPR011006 -
Dere06g0874 779 MobiDBLite consensus disorder prediction 532 553 - -
Dere06g0874 779 MobiDBLite consensus disorder prediction 371 392 - -
Dere06g0874 779 SMART REC_2 101 216 IPR001789 GO:0000160
Dere06g0874 779 MobiDBLite consensus disorder prediction 377 392 - -
Dere06g0874 779 MobiDBLite consensus disorder prediction 269 285 - -
Dere06g0874 779 Pfam CCT motif 725 766 IPR010402 GO:0005515
Dere06g0874 779 PANTHER TWO-COMPONENT RESPONSE REGULATOR 101 452 IPR045279 GO:0009736
Dere06g0874 779 FunFam Two-component response regulator-like PRR37 101 259 - -
Dere06g0874 779 MobiDBLite consensus disorder prediction 224 240 - -
Dere06g0874 779 Pfam Response regulator receiver domain 103 214 IPR001789 GO:0000160
Dere06g0874 779 MobiDBLite consensus disorder prediction 578 597 - -
Dere06g0874 779 MobiDBLite consensus disorder prediction 638 679 - -
Dere06g0874 779 MobiDBLite consensus disorder prediction 603 620 - -
Dere06g0874 779 ProSiteProfiles Response regulatory domain profile. 102 220 IPR001789 GO:0000160
Dere06g0874 779 ProSiteProfiles CCT domain profile. 725 767 IPR010402 GO:0005515
Dere06g0874 779 MobiDBLite consensus disorder prediction 224 285 - -
Dere06g0874 779 MobiDBLite consensus disorder prediction 468 520 - -
Dere06g0874 779 CDD psREC_PRR 103 206 - -
Dere06g0874 779 MobiDBLite consensus disorder prediction 241 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0874 Dere-ChrDere06 15788146 15827457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0874 89 316 Response Regulator Gene Family AT5G60100 63.983 2.29e-83 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Dere06g0874 Response_reg 6.4e-21 CL0304