Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0791 ATGGCTTCATCCTGGAGGAAGAAGCTTGATACCCATTTTTCTGTTGCATGGATAAAGAAGATAATGCAAGCAAAGGAAGACATTGGAAAAATAGCACTAACAGTGCCAGTTTTAGTTTTCAAAGCTCTTGAACTATTTTTGCAAGATCCTTGTGACCATACTAATGATATAACTCTTCGTAAAGGAGCAAAGACCATGAGTGCATTGCATTTAAAGTATTGTGTACAAAGCTATAATGTCTTTGATTTCCTGAGGGATATCATGAGCAGGGTGCCTGACTATGGTCATGGGCATGGGCATGGCCATACTGAATCTAATGCTGATGATCAAGCTATTTCAAAGAGAAGGAAAACAGTAGGTGATAATTGCAATGACAATGATGAGGAGTCAAAGAGGAGCAAGATGCATGAGTTGAACCACACTGGCAGTACTGAATTCCACTTGCTCTATAGCTTCCAAGCAAATGCTATGAAGGATGTTAACAATAATGGAAATGTGTCTATTTTCCAGTGA 513 0.3899 MASSWRKKLDTHFSVAWIKKIMQAKEDIGKIALTVPVLVFKALELFLQDPCDHTNDITLRKGAKTMSALHLKYCVQSYNVFDFLRDIMSRVPDYGHGHGHGHTESNADDQAISKRRKTVGDNCNDNDEESKRSKMHELNHTGSTEFHLLYSFQANAMKDVNNNGNVSIFQ 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0791 170 MobiDBLite consensus disorder prediction 117 136 - -
Dere06g0791 170 Gene3D Histone, subunit A 2 90 IPR009072 GO:0046982
Dere06g0791 170 SUPERFAMILY Histone-fold 7 95 IPR009072 GO:0046982
Dere06g0791 170 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 11 121 - -
Dere06g0791 170 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 15 75 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0791 Dere-ChrDere06 13719359 13720834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0791 6 138 CCAAT-HAP5 Transcription Factor Family AT3G12480 66.165 9.84e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dere06g0791 CBFD_NFYB_HMF 1.6e-11 CL0012