Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0783 ATGTCTTCCTCGAATGGTTCATGGACAGCAAAGGACAACAAAGCCTTTGAAGTGGCTCTTGCAGTGTACGACAAGGAGACACCAGACCGATGGTACAACGTTGCTCAGGCTGTGGGTGGTAATAAGACCCCAGAAGAAGTGAAGAGGCACTACGAACGCCTTCTGGAGGACCTCAGGCGTATTGAGTCTGGCCAAGTGCCTTTTCCCTACAAGTAG 216 0.5093 MSSSNGSWTAKDNKAFEVALAVYDKETPDRWYNVAQAVGGNKTPEEVKRHYERLLEDLRRIESGQVPFPYK 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0783 71 CDD SANT 7 55 IPR001005 -
Dere06g0783 71 SUPERFAMILY Homeodomain-like 5 63 IPR009057 -
Dere06g0783 71 FunFam Transcription factor SRM1 1 68 - -
Dere06g0783 71 Gene3D - 1 68 - -
Dere06g0783 71 SMART sant 4 57 IPR001005 -
Dere06g0783 71 Pfam Myb-like DNA-binding domain 6 55 IPR001005 -
Dere06g0783 71 ProSiteProfiles Myb-like domain profile. 1 55 IPR001005 -
Dere06g0783 71 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 69 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0783 Dere-ChrDere06 13474062 13474277 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere06g0783 Myb_DNA-binding 9.2e-06 CL0123