Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0781 ATGCCTCACGGAAAGCCCAGAAGGAAACATGCGAGTAACAAACGCCCGAATGATAAGGCGGCGTTTTCTGTAAGGGTTTTAGAGAAGCGAAGAGCTTCTCCCAAAACCCTGCCTACCCACGCTGCTTCATCGGTAAATTTTTTGCTTGCACGCTCATCTTCTCTACGATTTGATGATGTCATCCTGATTTTAGCCACTATGGCGAGACTTATCTTCGCCAAAAACTTCTTCGTTTTCTCGTCTTCATCATCATCAGCTCGTCCTCGTCTTCTTCAATTTTGTCACTTCTCAACAACCTCGTTGAATAACCCCTCATTTTCGAGGCGCCACGATGATGATTCTCGAAATGTGCCAGTTTCAGTATGGTGGGATTTCGAGAATTGCAATATATCTGCTGATACCAATGTTTTCAGAATAGCCCCCTCCATTACTGAAGCTCTCAGGGCCAAAGGGATAAAGGGGCCTCTTCAGATTAGGGCTTTTGGTGACGTAACTCAGCTCTCCAGGGTCAAACAGGAAGCTCTCTCATGCAGTGGGATAAATATCTCCCACATTCCAAATGGTGGAAAGAATAGTGCTGATAAAGCTCTTCTTGTTGACCTTATGTATTGGGTTTCCCAAAATCCTCCACCGGCACATGTATTTCTGATTTCTGGTGATAAGGATTTTGCTGGAATATTACACCGTTTAAGAATGGATAACTACAATATCCTGATTGCAAGTACTGAAAGGTCTTCTATTGTTCTCTGCAGTGCTGCAACTATCATGTGGCACTGGAATTCATTGCTTAAAGGAGAAAATCTTGCTGGAAAACACTTCAATCATCCTCCTGACGGTCTGTATGGTTCTTGGTATGGGCACCATAAGGTGCCCCTTGAGGAGCCCTTTGATGGTAAGCAGATTACATGTTCACAAACTGAGGAGACCTCTGAAGCTAATTCAGATTTGAAGTTACGTCCAATTCCAAAGGCAGTTGTGAGGCAGATTCGGCAAATATTAAATTCATATCCAAAAGGCATCTCTTTATCAGATCTTCGAGCAGAGTTGGGAAAAGCTGGTATTTGCTTAGATAAAGATTATTATGGACATAGAAAATTTTCCCGCTTTCTTTTATCTGTGGCTCGAGTAGAGCTTCAGCTTGGACCTGATAAAAATCTTTTTGTGCATCGCGTTCCCAAAAAAAGTCCTGAATACTCTGATAGCAGTTTCGCACCATCAACCGCATCGGTTGATTATGAGGAGTTGAACCATATGGCTACTGCAAAGTTAAGTGGTGAGGGGGAAAAGATGGTTAGGGATGCAAATGTGACACCATCAATGACCTCTTCTCATGAACTTAGTGCGAAAGATATTCCGGAAAAGGTCCCACAGGTTATGGATGTGGCTAATGCACAAGTGACTGAGAGTCAATTGCCTCCCAACAAGAATGAAATTCTTGGCTATAGGGATGTATGTCAGAGTGTTCCAGAAGAGCGTACAGCTTCACAGAATTACTCCGATGAGCAAAGTTACACAGCATTTGGAAAGAATGGCATTTCAAATGATATTTCTGAAAAGTTAAAAGCTGAGGACAAATATGTCAAACCCCCAAGAGAGGAGGCTGATGCAGTTTTTCATCTGCCTTATTCGTCACCAGCTGATGAATCTGTGACTGGCAAAATCATGGGTGGAAGTGCTGAAACTAACAAAAAATTTAGCAAACGCCTAACTTTCTTGGATTGGATTAGAAGTTTGTGGCCATTTAGGAAAGAGCCTGAGTTATCAGATCTGAAACAAACGGTTGGTCATTTTGAAGAGCCTGAATTATCAGAACAGAAACAAATAGGTAGTCACTCTGAGGCGCCCAAGTTATCAGAACTGAAACAGACTCTTTGTCATTCTGAAGAGCCTGAGTTATCAGATCTGAAACAGACGGTTAGTGATTCTGGAGTTTCCGAGACAGAACAGAAACAAACAGTTAGTCACTCTGAGGAGCCCAAGTTATTAGAACTGAAACAGACTGTTAGCCTTTCTGGCGAGCCTGAGTTATCTGAACTGAGACAAGCAATAAATCATTCTGGGGAGCCTAAGTTATTTTGTAGAAGTTCCTTTTGGAGTGAGATGGAATCTTTTGTTTTCACCTCCAAAGGATCAATTCTTGTTTCTAGGTCAAAAAGCAGGATGGATCTGATGCACAATTTTCAAAAGTATGGACCCCTGGCTCTTAGTTCTCTTAGTGAAAATGATCTCCTTCAACTGGTGGATTTGTTAATCTCTAAGAAAAAATGGTTGGAGGAGAGGCCTTCTCAGACTTTTCCTTTCCGTCTCACTCCACCAGCTGGAAAGAGCTCAATGGGCCTATCAGATGGTGCAACTGGCTTGAGATCTCTCTTTCTAAGCAGACCAACACACAGTAACTCGCAAAAATCGTCAGAATGTGATGTGGATAAAAAGTATCAGAGTATTCCTCACACTGGTGTTTCTTCACCTGGCCCTAAAAGGAAGCATACTGAGAGGTCTAGAACTGACATTTTAGCAGATATTCAGAAACTTGTGAGTGAAATATTGAGGGAACACTCAGATGGGTATAATATGGGTACCATTCCAAAACTTTTTCTTGAGAGGTATGGCTATCCTCTTGATGTTCAGAATCTTGGTTATAACAAATTGGCATCCCTTTTACAGATTCTGCCTGGAGTGAAAATAGAGTCTAATTATATCTTTCCTGCTGATCATGCCATATGTGCTCCTGGCCTGGAAACTTCAGTTCTCAATACTCAAGAGACCAAATTAAATGATGCAGTGTACTATTCGGATAATGAGCTGTCTGATTCATACCCTAAAGATGATTGCAATGACTCTCAATGGGAGGAATTAGGACCTGTTTCTGTCGGCAATTGCAACCAGAGTGACCTGCAATCAAAATCAATTCAGGAAGTTGTAAAGCTGGAGACTGTAATACATCCTGATTATGAACCTTCGCTCTCAGATGATGATTCTTCTGAATCTGAAGGGGATTGCTCTTGTTTAAATCACTTAGAAGAAAGAAAGCCAAAACTTAATGTGGAAGACAGTTCTTTATTGCAAACTCTCGACTCATTTTACAGCCGTCAAGAAGGAGAGGATAGTGTGAAGTCAGAAAATGCCGATACCGAAGGGAATGGTCTGGCTGATGGTTCAAATCCATCCAGGAAGTCCGCTCCAGGTGCCCATTACAAAACTCAGTCAGGGGAGCGTAGAGAGAAGCAAAAACCTCTAAAGAGCTATTCATTTGTTGCTGATCCGGTCTCCAATAAGAAGAACGAGCTGATTGATGGGATATTACAAAGCTTGTCAAAATCAAATGACTTGAAGCTGCAAAATTGA 3345 0.4185 MPHGKPRRKHASNKRPNDKAAFSVRVLEKRRASPKTLPTHAASSVNFLLARSSSLRFDDVILILATMARLIFAKNFFVFSSSSSSARPRLLQFCHFSTTSLNNPSFSRRHDDDSRNVPVSVWWDFENCNISADTNVFRIAPSITEALRAKGIKGPLQIRAFGDVTQLSRVKQEALSCSGINISHIPNGGKNSADKALLVDLMYWVSQNPPPAHVFLISGDKDFAGILHRLRMDNYNILIASTERSSIVLCSAATIMWHWNSLLKGENLAGKHFNHPPDGLYGSWYGHHKVPLEEPFDGKQITCSQTEETSEANSDLKLRPIPKAVVRQIRQILNSYPKGISLSDLRAELGKAGICLDKDYYGHRKFSRFLLSVARVELQLGPDKNLFVHRVPKKSPEYSDSSFAPSTASVDYEELNHMATAKLSGEGEKMVRDANVTPSMTSSHELSAKDIPEKVPQVMDVANAQVTESQLPPNKNEILGYRDVCQSVPEERTASQNYSDEQSYTAFGKNGISNDISEKLKAEDKYVKPPREEADAVFHLPYSSPADESVTGKIMGGSAETNKKFSKRLTFLDWIRSLWPFRKEPELSDLKQTVGHFEEPELSEQKQIGSHSEAPKLSELKQTLCHSEEPELSDLKQTVSDSGVSETEQKQTVSHSEEPKLLELKQTVSLSGEPELSELRQAINHSGEPKLFCRSSFWSEMESFVFTSKGSILVSRSKSRMDLMHNFQKYGPLALSSLSENDLLQLVDLLISKKKWLEERPSQTFPFRLTPPAGKSSMGLSDGATGLRSLFLSRPTHSNSQKSSECDVDKKYQSIPHTGVSSPGPKRKHTERSRTDILADIQKLVSEILREHSDGYNMGTIPKLFLERYGYPLDVQNLGYNKLASLLQILPGVKIESNYIFPADHAICAPGLETSVLNTQETKLNDAVYYSDNELSDSYPKDDCNDSQWEELGPVSVGNCNQSDLQSKSIQEVVKLETVIHPDYEPSLSDDDSSESEGDCSCLNHLEERKPKLNVEDSSLLQTLDSFYSRQEGEDSVKSENADTEGNGLADGSNPSRKSAPGAHYKTQSGERREKQKPLKSYSFVADPVSNKKNELIDGILQSLSKSNDLKLQN 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0781 1114 CDD LOTUS 838 895 - -
Dere06g0781 1114 MobiDBLite consensus disorder prediction 794 833 - -
Dere06g0781 1114 Gene3D - 832 900 IPR041966 -
Dere06g0781 1114 ProSiteProfiles OST-type HTH domain profile. 837 911 IPR025605 -
Dere06g0781 1114 MobiDBLite consensus disorder prediction 636 650 - -
Dere06g0781 1114 PANTHER LIMKAIN B LKAP 102 846 IPR024768 GO:0005777|GO:0010468
Dere06g0781 1114 MobiDBLite consensus disorder prediction 1028 1088 - -
Dere06g0781 1114 CDD PIN_limkain_b1_N_like 118 241 - -
Dere06g0781 1114 Pfam OST-HTH/LOTUS domain 323 382 IPR025605 -
Dere06g0781 1114 Pfam OST-HTH/LOTUS domain 838 897 IPR025605 -
Dere06g0781 1114 MobiDBLite consensus disorder prediction 628 658 - -
Dere06g0781 1114 ProSiteProfiles OST-type HTH domain profile. 321 392 IPR025605 -
Dere06g0781 1114 Pfam NYN domain 119 253 IPR021139 GO:0004540
Dere06g0781 1114 Gene3D - 322 396 IPR041966 -
Dere06g0781 1114 Gene3D - 112 260 - -
Dere06g0781 1114 CDD LOTUS 322 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0781 Dere-ChrDere06 13436268 13440288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0781 119 265 C2H2 Transcription Factor Family AT5G61190 42.857 1.20e-34 142