Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0744 ATGCGGATGAGCTGCAATGGATGCCGGGTTCTGAGAAAAGGTTGCAGTGAGAATTGCAGCATCAGGCCCTGTTTGCAGTGGATCAAAACCCCAGAGTCTCAGGCCAACGCTACTGTGTTTCTCGCCAAGTTCTATGGCCGAGCTGGCCTCTTGAACCTCATCAACGCTGGCCCTCAGCATCTTCGTCCAGCTATCTTTCGTTCTCTGCTCTACGAAGCATGCGGGCGGATAATGAACCCGATTTATGGATCCGTGGGTCTGTTATGGTCTGGGAGCTGGCAGCGCTGTCAGGCCGCCGTGGATGCGGTGCTGAAGGGCTCGCCGATCATTCCGATTAACTCTGAAGCCGCCGAGAGTGGGCGGAGTCCACCTATGAAGCCATACGACATACGCCACGTGTCCAAGGACGAGAACTCGACTGCGTCGATGGACGATCAGCGAGTAAAGAATCGATCGCGGTTTAAGCGATCCGCCGGGAAGCCGAAGAAAGCCAGCAAGGGGACCGGGTTAGGGTCCACTGAACCGGAAGAACCGCGAGATGGGTGTGCCCAGTGTTGCGCCGCGGCCGAAGAGGTGGTGTACCGATCGGCGAGTCACGAGTCGTCGCTGAGTCACCAGTCGGAGGAGGCGCCGCCGACCGCGGCTGTGACAACGGCGGAGGGAGAGAGCAGAGAGAGCGAGAGCATGGTTTCGGTGGAGACCGCCGAGACTTCGATGCTCTTCCGAGACGAACCGGAATCGACGGCGAAACGGAGTGAACGAGCCGATGGCGAGGGTGGTGATGTAGCACTGGAGCTGACCCTGGGGTTGGAACCAGTGTCACGTGCGCATCACGTGGTTCCGGTGAAGAAGAGGAAGGTGGATTTGACGCACTTCGATAGTGGCTCGGCCGAGAACGTATCATGCATGAAGATGAACTTGGGGCTTGAATTCCCGGCTTGA 942 0.5828 MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLLNLINAGPQHLRPAIFRSLLYEACGRIMNPIYGSVGLLWSGSWQRCQAAVDAVLKGSPIIPINSEAAESGRSPPMKPYDIRHVSKDENSTASMDDQRVKNRSRFKRSAGKPKKASKGTGLGSTEPEEPRDGCAQCCAAAEEVVYRSASHESSLSHQSEEAPPTAAVTTAEGESRESESMVSVETAETSMLFRDEPESTAKRSERADGEGGDVALELTLGLEPVSRAHHVVPVKKRKVDLTHFDSGSAENVSCMKMNLGLEFPA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0744 313 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Dere06g0744 313 MobiDBLite consensus disorder prediction 197 232 - -
Dere06g0744 313 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 268 - -
Dere06g0744 313 MobiDBLite consensus disorder prediction 114 180 - -
Dere06g0744 313 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Dere06g0744 313 PIRSF AS2 1 308 IPR017414 -
Dere06g0744 313 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0744 Dere-ChrDere06 12433518 12434557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0744 1 289 AS2 family AT3G02550 56.997 9.45e-103 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere06g0744 LOB 1.3e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g0744 06 12433518 12434557 Dere06g0744 06 12433518 12434557 ECH