Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0725 ATGTTCACTCCCACTAGTAATTACAACCTTTACTGCTTCCCTTCCTCGTCTTCTTCTTCTTCTTCGTATTCGTACCCTCTTCTTCATCCTCATCCTTTTGAAAATAATGCTTCTTCTTCTGCGAATACCACCTTCCACCTTCATGATCCACTTTCTCTCCCCTTCATACCCGCTCTATTTTCCGAACAACTTACCAATCTGGCTGCGCCTTCAGACTATGCAACTATGGCCGCCAAACAGGATGACATTGATCCCCATTTTAATGGCATTTCCGTTAATTTCAACGCCAAGAAGCCATCCTCGGCCAAGAAAGATAGGCACAGCAAGATTTACACATCTCAGGGGCTGAGAGATCGACGAGTGAGACTGTCCATTGAGATCGCCCGCAAGTTCTTCGATCTACAAGACATGTTAGGGTTTGACAAAGCCAGCAATACTCTCGACTGGCTCTTCACCAAGTCCAAGAAAGCAATTAAGGAGCTCGAACAAGCAGCTCGAAGCAATAAGAATAGCACCAACACCAACAGGAGCTTCTCTTCCTCTTCTGAGTGCGAAGAAGTGGTTTCCTCCCAGAGGGCGGATTCAGATTCGTGCAAGTTGAGGAGGGCCGAGAAGGAGAAGGCGAAGAAGGAGTCGAGGGAGAAGGCGAGAGCGAGGGCGAGGGAAAGGACTAGTCACAAGGGAAAGAGCTTAGTGGTGGTTGGTGGTGGTGGTGATGCACAAGAAAGAGAGGACTTCAAGGTGATTGAGGAGTCTATTGTGATCAAAAGGAAGTTGAAGCAGCCTTCTAATTTGATGCCTTCGAATCAACCCCAAAACCACCTTGTGATCCCTGAAAAAGAAGCAGGTTTTACCAACACTACTACTACTACTACTCCTAGTACTACTTATGACTACTCCTCAATATTCCCCAATCTGTCTCCAAATTGGGACACCAATGGGCGCTCCAACTTCTGTGCTATAGCCAGCATGAACCTATCAACAGAGTTTCAAATCATTGGGAAGTCTTGGGATGAGTGCAACAATCAGCGTCTACACTAG 1041 0.4669 MFTPTSNYNLYCFPSSSSSSSSYSYPLLHPHPFENNASSSANTTFHLHDPLSLPFIPALFSEQLTNLAAPSDYATMAAKQDDIDPHFNGISVNFNAKKPSSAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELEQAARSNKNSTNTNRSFSSSSECEEVVSSQRADSDSCKLRRAEKEKAKKESREKARARARERTSHKGKSLVVVGGGGDAQEREDFKVIEESIVIKRKLKQPSNLMPSNQPQNHLVIPEKEAGFTNTTTTTTPSTTYDYSSIFPNLSPNWDTNGRSNFCAIASMNLSTEFQIIGKSWDECNNQRLH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0725 346 Coils Coil 201 223 - -
Dere06g0725 346 ProSiteProfiles R domain profile. 210 227 IPR017888 -
Dere06g0725 346 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 79 256 IPR005333 GO:0003700
Dere06g0725 346 ProSiteProfiles TCP domain profile. 103 161 IPR017887 -
Dere06g0725 346 MobiDBLite consensus disorder prediction 189 228 - -
Dere06g0725 346 Pfam TCP family transcription factor 102 228 IPR017887 -
Dere06g0725 346 MobiDBLite consensus disorder prediction 164 188 - -
Dere06g0725 346 MobiDBLite consensus disorder prediction 163 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0725 Dere-ChrDere06 12237220 12238590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0725 102 224 TCP Transcription Factor Family AT1G67260 47.403 4.32e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere06g0725 TCP 4.5e-38 No_clan