Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0708 ATGTGGAAGAGAATCAGGAAATCTCAATTTCTAGTAACTGAAAATTTGAGCAAGCAAGTGCGTTCGTCGACTGTGTCATCTGAGCTCTGGGAGGATCGTCCACTGCGGCTCCTTCTCGCATCTTCGTCGCCTCAGGTGCATATGGGGGTGGTGCGATTAAGGAGGACAAGGGGAATAGCAGAGCTGATAGAGGGCAACAGTGCTAAACAGGTTTACACAATTGAAGTCCTCAACAGCTGCAGACTAAGAGCTCCTCCTTTAAGAAAGATGGCAAGAGTAAGGGATAGAACAGAGGATTTTAAAGATGCTGTACGACAGAGTGCTCGCTCTTTGGGATATGATGAGGCTAAATTGGCATCTGTTATGGCATCTTTTATTATCCACAAACCTCGGCAAAGGTCACCATTTACTAAAGCTGCGCTGAAGACGCTTGAGAGTATTGGAGAATTGGACCACTTCTTATTGAAGCATAGAAAGGACTATACAGATCTGCACCGCACAACTGAACAGGAGAGAGATAGCATTGAACATGAAGTCAGTGCTTTTATCAAAACTTGCCAAGAGCAAATTGATGTTCTCAAAAATAGCATTAATCATGAAGAGGCAGACTCAAAAGGCTGGCTTGGCATTGCAACTTCTAATTCTAATGCTGACACTATTGCCCACAAACATGGAGTGGTTCTAATTTTGAGTGAGAGACTCCATTCCGTTACTGCTCAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAACAGAGCTATACCACGAAGAAAACTTAACCGTGTGACCAGAAAAGATTCTGCCGAAACCTCTAACTTAAATAATATGGAGCTCAGAGGACCTGATGAGTTACGCGATGAGACTCTAAGAGTCCAACAACAACAATTATTGGATGATGAAACTCGTGCTCTTCAGGTGGAATTGACTAGTCTTCTAGATGCAGTTCAAGAAACTGAAACAAAGATGGTGGAAATGTCTGCACTGAATCACCTAATGTCAACCCATGTTTTGCAGCAAGCTCAGCAAATTGAGCTCCTATATGAGCAGGCTGTTGAAGCTACTAAGAATGTGGAGCTTGGTAACAAAGAACTATCCCATGCCATTCAGCGGAATAGCAGCAGCAGGACATTTCTTTTATTGTTTCTCTTTGTACTTACTTTTTCTGTCCTCTTTCTTGATTGGTACAGTTAA 1200 0.4283 MWKRIRKSQFLVTENLSKQVRSSTVSSELWEDRPLRLLLASSSPQVHMGVVRLRRTRGIAELIEGNSAKQVYTIEVLNSCRLRAPPLRKMARVRDRTEDFKDAVRQSARSLGYDEAKLASVMASFIIHKPRQRSPFTKAALKTLESIGELDHFLLKHRKDYTDLHRTTEQERDSIEHEVSAFIKTCQEQIDVLKNSINHEEADSKGWLGIATSNSNADTIAHKHGVVLILSERLHSVTAQFDQLRAVRFQDAINRAIPRRKLNRVTRKDSAETSNLNNMELRGPDELRDETLRVQQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSHAIQRNSSSRTFLLLFLFVLTFSVLFLDWYS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0708 399 PANTHER SYNTAXIN-18 90 399 - -
Dere06g0708 399 SUPERFAMILY t-snare proteins 145 363 IPR010989 GO:0016020|GO:0016192
Dere06g0708 399 Gene3D - 301 396 - -
Dere06g0708 399 FunFam Syntaxin-81 like 302 396 - -
Dere06g0708 399 Pfam SNARE-complex protein Syntaxin-18 N-terminus 95 175 IPR019529 -
Dere06g0708 399 Coils Coil 183 203 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0708 154 399 SNARE and Associated Proteins AT1G51740 76.423 1.86e-118 342